| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1878 |
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| Symbol | |
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| ID | 5753621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2246470 |
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| End bp | 2247174 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641288159 |
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| Product | sortase family protein |
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| Protein accession | YP_001554309 |
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| Protein GI | 160874993 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0907818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG GCAGAACACA GCGATTTTTA GTGGTGGGAT TATTTTTAAT TGGCGCAACA
TTGTTAGGAA AGGGACTCTA TATGCAAGCT AAAGCACACT TTGCCCAGTA TTTGATTGAA
CAGGCGTGGA CTAAAACCTT AGCCGATGGA CAATCTCATA AGCCTTGGTC ATGGGCGGAT
ACTTATCCCG TGGCAAAGCT GTCGATTTAC CGCGAGCAAG CGGCTAATAG CGATATTGAA
GCCGAGCTTA ATGACAGTTT ATATGTGTTG GCGGGGGCTT CAGGGCGAAA TTTGGCCTTT
GGCCCAAGTT TAGTATTGTC CAGTGCGCCA GCGGGGCAAA AGGGCAATAC TGTGATTGCC
GGACACAGGG ACACGCATTT TGCGATCCTC AATGGCATGG CGGTGGGTCG CCGATTATCG
CTGCAGACGC TTAAGGGAAA TAACATTATT TATGAAGTGG TTGCAACTCA GGTGGTAAAT
GAAACTGAAA CGCAGTTTAT GGCGCCATCC GATGATAATC GCTTAACCTT AATCACTTGT
TATCCGTTCG ATGGACTTCA AGGCGGCGCC GAACTGCGCT TTGTGGTGCA GGCGATACTG
GTTGAAGATG AATCAATGGA TACGGCTAGT GCCGATGTTT CAGCTTCAAT AGGGAATGGG
ATACAAGGGA AGGTCGCTTC TGGAACGCGC AGTTTCACCC ATTAG
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| Protein sequence | MSKGRTQRFL VVGLFLIGAT LLGKGLYMQA KAHFAQYLIE QAWTKTLADG QSHKPWSWAD
TYPVAKLSIY REQAANSDIE AELNDSLYVL AGASGRNLAF GPSLVLSSAP AGQKGNTVIA
GHRDTHFAIL NGMAVGRRLS LQTLKGNNII YEVVATQVVN ETETQFMAPS DDNRLTLITC
YPFDGLQGGA ELRFVVQAIL VEDESMDTAS ADVSASIGNG IQGKVASGTR SFTH
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