Gene Sbal195_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1561 
Symbol 
ID5753293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1880761 
End bp1881480 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID641287833 
Producthypothetical protein 
Protein accessionYP_001553994 
Protein GI160874678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.296774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.739172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATT CGCTGCATAA CACGTTACAT CGAGAGCGAA GTGGAGAGCT TAATCGGGGC 
CTAAGTCGAA GGCAGGATCT AAGCCTAAGT CGAGGACTAA ATCTAGATAT TAGCCGAGTG
CTCAATAGAT ATTTAGCAGT GTTAGTGCTG CTGTTCACGG GCGCTTTAGG TCTTACAGGG
TGCGTGACAG TGACGGATAA CGCGGCGCAG CCGCTGCGAA CCACAGTCGT GATGTCTGGC
GATCTCAGTG AATTACCACC AACCGCCATG ACGTACACTT GGCATCCAAA GTTTCAAAAA
ATTATCACAG ACAAGCGCTT AGAGCCGCAG CAAGTGTTGC AGCACATGCA AGATGTACTC
AAACAAAGTT TGCAGAATAA AGGATATCGC TGGGTTGAAG ACCCACAACT GGCGGATTTT
CAGGTCGGGT TTGGTGTCGC CATGGGCACT GAAATGAGCG ATGAGCAAAT TCTGGCGGTA
ACAGGCTTGG TTGCTGGGCT TTCGACCGAC GGTGTGAACA CTAAAAAGTA TGACAAAGGC
ACTGTGGTAA TAGCACTGTT TAAGCCGACT AAAATAAAGG GCGGCGGTAA CGAGCCCATT
TGGCGTGTAC TTGCCCAAGG CTTTGGCAAC ATTAAAAAGA TGGATGAGCT AACCGAAAAC
TTCGACAGTT TAATTGCCAG CATGGTGGCC AACATGCCAT CGGTTAATGT GGCACCTTAG
 
Protein sequence
MINSLHNTLH RERSGELNRG LSRRQDLSLS RGLNLDISRV LNRYLAVLVL LFTGALGLTG 
CVTVTDNAAQ PLRTTVVMSG DLSELPPTAM TYTWHPKFQK IITDKRLEPQ QVLQHMQDVL
KQSLQNKGYR WVEDPQLADF QVGFGVAMGT EMSDEQILAV TGLVAGLSTD GVNTKKYDKG
TVVIALFKPT KIKGGGNEPI WRVLAQGFGN IKKMDELTEN FDSLIASMVA NMPSVNVAP