Gene Sbal195_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1490 
Symbol 
ID5753222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1793654 
End bp1794151 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content43% 
IMG OID641287762 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_001553923 
Protein GI160874607 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000751414 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAATC GCGCGCTGAT GACGTTAGTT TTGTTAGGCG CGCCGTTAAT GGCACATGCT 
GAGAAAATTG CCGTAGTGGA TATGGGCGCT GTGTTCGAAC AGCTGCCACA ACGTGAGCAG
ATCTCTCAAT CTCTGAAGAA AGAGTTTGGC GATCGCATGG CTGATGTCCA AAAAATGCAA
GAAGAAATGC GCTCTCTAAT GGAGAAGCAG CAACGTGACG GTGCGTTAAT GAACGATGCA
CAAAAAACGG AACTGGTTCG TAAAATGGAA TCGCTAAAAT CTGAATATCA GTTAAAAGGC
AAAGCATTGG ATGAAGACTT ACGTCGTCGC CAAGGTGAAG AGCAAAATAA ACTGTTAGTT
AAAGTGCAAA AAGCCATCAA CACTATCGCT GAAAAAGACC AATATGATTT GGTATTACAA
CGTGGTGCAG TCATTTATGT TAAGCCTAAC GCTGACATCA GTGGCAAAGT GGTTGAAGCC
TTAAGCAAAG GCAAGTAA
 
Protein sequence
MVNRALMTLV LLGAPLMAHA EKIAVVDMGA VFEQLPQREQ ISQSLKKEFG DRMADVQKMQ 
EEMRSLMEKQ QRDGALMNDA QKTELVRKME SLKSEYQLKG KALDEDLRRR QGEEQNKLLV
KVQKAINTIA EKDQYDLVLQ RGAVIYVKPN ADISGKVVEA LSKGK