| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1418 |
|---|
| Symbol | |
|---|
| ID | 5753147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1701811 |
|---|
| End bp | 1702401 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641287688 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001553852 |
|---|
| Protein GI | 160874536 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAA CTTGTAATTT TGATCGGCGG GAAAAACTCA TATTGGCAAT GGAGCTTTTT
TGGCAAAAGG GCTTTGCCGA AACCTCGATT TCCGATCTCG TCGGCCATTT AGGCATTAAT
CGATTTAGCC TTTATAACAG TTTTGGTGAC AAGCAGAAGC TTTACCGTGA GTGCCTCAGT
TTCTACCTTG ATAACTACTC TTTTGGTGCC TCAGATACTC TGCTGCATGA AAAAGCGGGC
TTGGCCGAAA TAGCAGCTTA TCTAGCGCGC TTTGTTGCCC TGCAGCGGGA ACAAAAATAC
GGCTGTTTTA TGCAAAATGC CGTGTTAGAA AAGAGCCTTG ACGATGAGAG TGTACTGCAG
GAATGTCAGC GTTTATTTTG CCGATTACAG ACCTCATTCA CTCAAGTGTT GCAGGACTGC
CAAGCGCGAG GTGAGTTATT GGCCAATGTA CAACCGCATC AGGTCGCTGC ATTTTTAGTA
CTGCAATTAC AAGGAATTAG AGTGTTAGGT AAAGCGGGCG AATATGAACT GCTAGATAAT
GCATTCGCGG TATTGCAGGG CTACATAGGC AGTTTAAATA CAAAAGTTTA A
|
|---|
| Protein sequence | MARTCNFDRR EKLILAMELF WQKGFAETSI SDLVGHLGIN RFSLYNSFGD KQKLYRECLS
FYLDNYSFGA SDTLLHEKAG LAEIAAYLAR FVALQREQKY GCFMQNAVLE KSLDDESVLQ
ECQRLFCRLQ TSFTQVLQDC QARGELLANV QPHQVAAFLV LQLQGIRVLG KAGEYELLDN
AFAVLQGYIG SLNTKV
|
|---|
| |