Gene Sbal195_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1050 
Symbol 
ID5752771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1244613 
End bp1245644 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content49% 
IMG OID641287314 
Productperiplasmic binding protein 
Protein accessionYP_001553486 
Protein GI160874170 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4558] ABC-type hemin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTC AAGCAACTAA AATGTCATTA AAAATAGATA CTAGCGCCCT TGGCCATCGG 
CATAAGCCTA AGTGCGCATT TAATCCGTTA AGCCGATTTA AGCCATTAAG CAAAGTGGCA
TTTGTCGCCT CAGCATTTGC GGCTTTGCTA TCGTCCAGCG CCTTTAGTGC TGAGCCCAAT
GCTGTACTGA GTACAAAATC TAATGCTGAA ACAAATTCCA AACATGAGAT AAGACTCGTG
AGTGCGGGCA CGGGTGTCAC TGAACTCGTG CTCGCCCTCG ATGCGGGTAA TGAGCTGATC
GCCATAGATT CCACCAGCTA TGTACCTGAC GGTCTAGCCC ATGTGGCGAA GCTTGGCTAT
CACAGAATGC TCTCCGCCGA AGGTATTATT GCGCTCTCGC CAACACTCGT TGTCGGCTCG
GATGTTATGG GGCCTGAGAC CACGCTCAAT GTATTGAAAC AAGCCAATAT CCAAGTTGTG
CAGTTACCCG CAACGAACGA TGAGCCGCAA CTAATGAGCA ATGTGGATAC CTTAGGTCAA
TTACTCAACC GTCCAGATAA CGCCATTAAG TTAAAGCAGG ACTTACATCA ACAACTGCAA
AGCTTAGCGG ATAAAAAACA GCAAATAAGC GATGCTGGCG CTCAGCCAAA AATCCTCTTT
ATGCTGCTAC AAGAAGGCCG TGGCGCACGG GTCGGCGGTA AAGGCACTGC CGCTGATACC
ATTATCGCGC TATCAGGCGC ACAGAATATC GCCGAGTTTG ATGGCTACAA AAGTATGTCT
CAGGAAGGGA TTTTGTCCTT GCAGCCCGAC ATTATCTTGT TGTCAAAGCG CAGCGATAAA
CCCGCCGAGC AAACCAACGC GCAAATTGCC CAAGAACTGA TAAAAGAGAT GCCGCTAATT
GCCCATACCC CCGCGGGTAA AAACGGCAAT ATTCAAACGC TGCCGCCACA AGCGCTTCTC
GGCGGCTTAG GCATCAGTGC CATTAGCGCC GCCGATACGC TCGCCAGCAC ATTGCTCAAG
CAAAATCAGT AA
 
Protein sequence
MLFQATKMSL KIDTSALGHR HKPKCAFNPL SRFKPLSKVA FVASAFAALL SSSAFSAEPN 
AVLSTKSNAE TNSKHEIRLV SAGTGVTELV LALDAGNELI AIDSTSYVPD GLAHVAKLGY
HRMLSAEGII ALSPTLVVGS DVMGPETTLN VLKQANIQVV QLPATNDEPQ LMSNVDTLGQ
LLNRPDNAIK LKQDLHQQLQ SLADKKQQIS DAGAQPKILF MLLQEGRGAR VGGKGTAADT
IIALSGAQNI AEFDGYKSMS QEGILSLQPD IILLSKRSDK PAEQTNAQIA QELIKEMPLI
AHTPAGKNGN IQTLPPQALL GGLGISAISA ADTLASTLLK QNQ