Gene Sbal195_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0509 
Symbol 
ID5752226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp582712 
End bp583932 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content49% 
IMG OID641286771 
Producttype II secretion system protein 
Protein accessionYP_001552947 
Protein GI160873631 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.013646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTT ATCAATACCG TGGACGCAGT GGTCAAGGTC AGTCTGTTAC GGGACAATTG 
GATGCCGCGT CGGAAAGTGC TGCCGCTGAC ATGCTATTGG CGCGGGGGAT TATTCCCCTC
GAAGTCAAAG TCGCTAAAGT GGTTAAGTCA TTCTCACTGG CCCAGCTGTT TGGTGGAAAA
GTTGCGTTAG AAGAATTACA GATCTTTACT CGGCAAATGT ATTCTCTGAC TCGTTCTGGC
ATCCCGATTT TACGGGCGAT TGCGGGGTTG TCTGAAACGG CACATTCCCA GCGGATGAAA
GATGCGCTCA ACGATATTTC TGAGCAGCTC ACCGCAGGAC GGCCCTTGTC ATCATCCATG
AATCAACATC CCGATGTATT TGATTCCTTG TTTGTTTCTA TGGTGCACGT GGGAGAAAAC
ACCGGTAAGT TAGAGGATGC CTTTATTCAG CTTTCGGGTT ATATCGAGCG TGAGCAGGAA
ACGCGGCGAC GAATTAAATC GGCCATGCGT TATCCCATGT TTGTATTGAT TTCGATAGCA
CTCGCTATGG TGATCCTCAA TATCATGGTG ATCCCTAAGT TCGCCGAGAT GTTTTCCCGC
TTTGGCGCTG ACTTACCTTG GGCGACAAAA GTGTTGATAG GTACATCGAA TCTGTTTGTG
AATTATTGGG CGCTGATGTT GGTGGCGCTG ATTGGCACTA TCATTGGCAT CCGTTATTGG
CACCATACGG AAAAGGGCGA GAAACAGTGG GATAAGTGGA AACTGCACAT CCCCGCCGTA
GGATCGATTA TCGAGCGTTC GACGTTAGCC CGTTATTGTC GCAGTTTCTC TATGATGCTG
AGCGCTGGCG TGCCGATGAC GCAGGCCCTA AGTTTAGTGG CTGATGCGGT AGATAATGCC
TACATGCACG ACAAAATAGT CGGTATGCGC CGTGGGATTG AGTCTGGCGA CTCTATGTTA
AGGGTATCGA ATCAGAGTAA GTTATTTACG CCGTTGGTGC TGCAAATGGT GGCAGTGGGT
GAAGAGACGG GGCAAATCGA TCAATTACTC AATGATGCGG CAGACTTCTA TGAGGGCGAA
GTAGACTATG ATTTAAAGAA CCTCACCGCT AAATTGGAGC CTATTTTGAT CGGTTTTGTG
GCCGTGATTG TACTCGTGTT GGCCTTGGGG ATATACCTGC CCATGTGGGA TATGCTTAAT
GTGGTCAAGG GCGGTAAATA A
 
Protein sequence
MPIYQYRGRS GQGQSVTGQL DAASESAAAD MLLARGIIPL EVKVAKVVKS FSLAQLFGGK 
VALEELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSSM
NQHPDVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKSAMR YPMFVLISIA
LAMVILNIMV IPKFAEMFSR FGADLPWATK VLIGTSNLFV NYWALMLVAL IGTIIGIRYW
HHTEKGEKQW DKWKLHIPAV GSIIERSTLA RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDKIVGMR RGIESGDSML RVSNQSKLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPILIGFV AVIVLVLALG IYLPMWDMLN VVKGGK