| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0478 |
|---|
| Symbol | |
|---|
| ID | 5752195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 547616 |
|---|
| End bp | 549340 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641286740 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001552916 |
|---|
| Protein GI | 160873600 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.486321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCC TTATTTCCAT ACTCGTTGCT AATGCCTTGT TTATGTCGGG CCAAGCCCTT
GCTGCACCGA ACGATGTGCA AAGTGAAACG CAAAAAATTA CCGAACTCAA GCAGCAACTT
GCCGATATTA CCGAGCAATT GGATGATCTT AATGATCGCG TAGATAAAAC CGAGCGACAC
ACATCATTAG ATCGTCTTGA AATTACAGGT GATTTCCGCA CTAAAGCCCA TTCATTGCAT
TACCAAGATG TAGTCTGGAG CCCAGCGATG AAGGTTAACT TCAACGACTT TGGCGCCAAA
GCTATGTCTG GCGCCTTCGG CATGCCCAAC GATCTAAATT CACCACTTGG AAAAATGATG
CAAGCCAATC CAGACCTTGC CGCCGCCTTC CAAAATGGCA TGTTGCAGGG CGTGATGCCC
TATGTGCTCG CCCCCAAAAG CGTGCAGGAC ATAGATAACG ACATCTACTA CACCACTCGT
CTGCGCCTCA ACCTCAAGGC AAAAGTATGG GATAACGTCA GCTTTGCTGG CCGTCTCAGT
ATGTTCAAAA ACTGGGGCGA CTCCACAGGA GTGCAAGTAT TTGACTCTTG GCGGTCTTTC
ACTATGGATG GCACCAGCAG CGGCAATACC AGTGGCGACT GGCTGCGGGT CGAACGCGCC
TATTTTGACT GGAAAAAAAT CAACGGCTCC GAGTTTTATC TCTCCATTGG CCGTCGCCCT
TCAACCTATG GCCCACCAAG CCACTACCGT GAAAACGAGC TACGCGGCGG CACGCCTTCA
GGCCATTTAG TGAACTTCAA CTTCGATGGC GCGACCTTAG GTTATAACCT AGGGGAAATC
ACCGGGGTTG AAGGGCAAGT TGTCCGCTTC TGCTACGGCC AAGGCTTTGA ATCACAATGG
GGCAATGGCG AAATGTTCGG TGACATAGTC ACTAAAGATA CTCACCTCGG CGGTTTTAAT
ATCGATGCCA TCAACGATGG AACTAACTTC CTGCAATTCA CCTTGTTTGG CGCGAAAAAC
GTAAATGACG GCTTTAAAGG CACTATGGCC TTTCCAACCC AATTAGCGGG AATTTTTGCT
CCGACCATGT ACCAAGATAT GCAAAAGTTC GACAACTTTA ACTTTGTTAC CCGAGTACAA
CCCAGCGGTG TGATTGGTGA CATGTACTTA GGCGGGATTG GCTTTGCGCG TGAAGAAGCA
AACGATATTA AATGGTTTGC CTCACTCGGC TGGACTCGCG CCGAGCCCAA TGGCAACGCA
GGTATGTTTG GTGGCATGTT ATCCGATGCT ATCTTCGAGG CTGAGTTAAA TAGCACTGGT
ACTGAGATCA TCATGGTGCC TAAAACCAGT GACGATAGTG ATACCAAAGA CGGTTACGGC
ATTTATGTCG GCGTACAAAT TCCTGCCCCC TACGGCAAGT TTGGTCTGGA ATATAACTAT
GGTTCTAAAT ATTGGACACC CTTCACCCAA GCCCAAGACG ACCCTATCGG TAGCAAACTT
GCCACCCGTG GTCATGTGGC AGAAGCCTAT TATATCTTTG ATATCAATCC AAAAATGTTT
ATCAAATTGG CCGGGCTTTA CTACGACTAT GAATACACAG GTAGCGGCAC ACCTGTGGGT
GCTCCGCAAA AAATTGATGA TGTGTTAGCA GGTTCGGCTT ACTCCATGTT GCCTGTGGTT
GATACCGCCT TCGACGTGAA CGCCTCACTC ACAATTAACT TCTAA
|
|---|
| Protein sequence | MRTLISILVA NALFMSGQAL AAPNDVQSET QKITELKQQL ADITEQLDDL NDRVDKTERH
TSLDRLEITG DFRTKAHSLH YQDVVWSPAM KVNFNDFGAK AMSGAFGMPN DLNSPLGKMM
QANPDLAAAF QNGMLQGVMP YVLAPKSVQD IDNDIYYTTR LRLNLKAKVW DNVSFAGRLS
MFKNWGDSTG VQVFDSWRSF TMDGTSSGNT SGDWLRVERA YFDWKKINGS EFYLSIGRRP
STYGPPSHYR ENELRGGTPS GHLVNFNFDG ATLGYNLGEI TGVEGQVVRF CYGQGFESQW
GNGEMFGDIV TKDTHLGGFN IDAINDGTNF LQFTLFGAKN VNDGFKGTMA FPTQLAGIFA
PTMYQDMQKF DNFNFVTRVQ PSGVIGDMYL GGIGFAREEA NDIKWFASLG WTRAEPNGNA
GMFGGMLSDA IFEAELNSTG TEIIMVPKTS DDSDTKDGYG IYVGVQIPAP YGKFGLEYNY
GSKYWTPFTQ AQDDPIGSKL ATRGHVAEAY YIFDINPKMF IKLAGLYYDY EYTGSGTPVG
APQKIDDVLA GSAYSMLPVV DTAFDVNASL TINF
|
|---|
| |