| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0279 |
|---|
| Symbol | |
|---|
| ID | 5751989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 319259 |
|---|
| End bp | 320110 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641286538 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001552721 |
|---|
| Protein GI | 160873405 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATA TTCTGTTAGT TGCCAATCTC AACTGTGATC GGATTTTACT GCTTGATAAA
CCTTTAAAAA CAGGTGGGCG TTTCCATTAT CAAGATGGTG GACAAAGGCT CGGTGGCGGC
GGGGCAAATA CCGGATTAGG TTTAGTTTGG GCAGGGCATA GCGTCGCCTT GGTGAGTCAA
GTTGGCCGTG ATGACATGGG AGATTGGCTC ATTGCAGAAG CCAGCACTCA AGGACTCGAT
TGCCGCTTAG TGCAGCGCCG AGCCGGTAAC ACTTGCGAAA TGTTACTCGT GATGACGCCA
GACGGTGAAC GGACGATTAT TCGGCCACAA AGACCCATAT TTGAATTATC GGTACCGCCG
AAATGGCAAC CATGGGATGC GTTATATTTT AATACTTCCG CAGAAGGCAC TGTTAGTTGG
GCAAAAACAG CTTTAGAACA TTGCCTAGTG GTCGCGCAAT TAGCCAAGGA TGATAGGCAG
AGACCTTGTC ATGTTTTGCT GGCCTCTATG AGCGATATGC AGGGGAGGTG TGAAGCGGCA
TTCTGGGAGT ATGGTGTGAG TATTGCTGGC AATTCATTAG GTTATTTTAT TGTCACCGAT
GGCATCAATG GGGCTAAGGT TTACACGCAC GATCAAGTGC AGCATGTTGC GGCTATCCCT
GCCACTGTAG TTGATACTAC AGGCGCTGGC GATGCCTATG CCGCAGGACT TATCCATAGC
CTATGCACTG GCCAGTCGAT TACTGAGGCA ATGGCAGAAG GCGCAGTGTG GGCGGCGTTT
GCAGTGGCAA CCGATAGTTC TATTCCTGGT GAGGCACTAA AACAGTATTT AGAGGCCAAG
CAAATCGCAT GA
|
|---|
| Protein sequence | MANILLVANL NCDRILLLDK PLKTGGRFHY QDGGQRLGGG GANTGLGLVW AGHSVALVSQ
VGRDDMGDWL IAEASTQGLD CRLVQRRAGN TCEMLLVMTP DGERTIIRPQ RPIFELSVPP
KWQPWDALYF NTSAEGTVSW AKTALEHCLV VAQLAKDDRQ RPCHVLLASM SDMQGRCEAA
FWEYGVSIAG NSLGYFIVTD GINGAKVYTH DQVQHVAAIP ATVVDTTGAG DAYAAGLIHS
LCTGQSITEA MAEGAVWAAF AVATDSSIPG EALKQYLEAK QIA
|
|---|
| |