| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0178 |
|---|
| Symbol | |
|---|
| ID | 5751875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 216246 |
|---|
| End bp | 217352 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641286424 |
|---|
| Product | stearoyl-CoA 9-desaturase |
|---|
| Protein accession | YP_001552620 |
|---|
| Protein GI | 160873304 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0621895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.238137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC CCCCTATCAT CTGGCTTAAT GTCAGTCTGT TTGCCATCAC TTTCCTCAGT
GCGGTGATCT TAGTTCCATG GCGCGGTATT GTTCACGGCT ATGGCGCCAG TGAATGGATC
GCTTTTATTG TCTTAGCCTT TGCCAGTGGT TTGTCGATCA CCGCAGGTTA TCACAGACTG
TGGTCACACA AGGCCTATAA AGCCCATCCA GCCGTGCGGT TTATGTATGC ACTCGGTGGT
GCTTTAGCAT TACAAAACAG TGCATTACAT TGGGCATCCG ATCACAGAAT CCACCACAAG
CACGTAGACG ACAACGACAA AGACCCGTAC TCAGCCAAAA TGGGATTCTG GTACAGCCAT
ATCGGTTGGA TGCTGCGTGA GTACCAGTCG CAACGCTATC ATGATTATCA AAATGTGCGC
GATCTGCAAA ATGACCGTAT CGTTATGTGG CAACACAAAC ATTACCTCGC ACTCGTTTTG
CTGATGAACA TTGGACTGCC TGCCCTGCTC GGCTGGCTGA ACGGCGACGT ACTGTCTATG
TTATTGATGG CGGGTTTACT GCGTTTAGTG GTGGTGCATC ACTGCACTTT CTTCATCAAC
TCTTTAGCCC ACGTGTGGGG CAGCCAGCCT TATACCGATA AGAACACTGC CCGCGATAAT
GGCTTTCTCG CCATGCTGAC CTACGGTGAG GGTTACCATA ATTTCCATCA CATCTTCGAA
AATGACTATC GTAATGGCAT TAAATGGTGG CACTACGATC CAACTAAATG GTTGATTAAG
TCATTATCTT GGTTGGGGTT AGCCAAGGAC TTGCGTACGA GTCCACAGGA ACGTATCGAG
AGCGCACGCT TGCAGATGCA GCTGCTGCGG ACCAAGAATA AAGTCGTGCA CTTACCCAAT
GCCGATGAAA TTATTGAAAA AGTCCAAGCT GAGTATGAAT TACTCAAGCT GCACTTAATG
GATTACTACC AAGCGAAGAA AACCTTGCTT GAGGCCAAGC GTAAACAACT TGTCGATCAG
CAGCTATTGC AGCAAGTTGA AGAGCTAAAA GCGCGTTTCT TAGTCCAGCA AAAACATTGG
CGAAGCCTAA CCGCAACTTA TAGCTAA
|
|---|
| Protein sequence | MKKPPIIWLN VSLFAITFLS AVILVPWRGI VHGYGASEWI AFIVLAFASG LSITAGYHRL
WSHKAYKAHP AVRFMYALGG ALALQNSALH WASDHRIHHK HVDDNDKDPY SAKMGFWYSH
IGWMLREYQS QRYHDYQNVR DLQNDRIVMW QHKHYLALVL LMNIGLPALL GWLNGDVLSM
LLMAGLLRLV VVHHCTFFIN SLAHVWGSQP YTDKNTARDN GFLAMLTYGE GYHNFHHIFE
NDYRNGIKWW HYDPTKWLIK SLSWLGLAKD LRTSPQERIE SARLQMQLLR TKNKVVHLPN
ADEIIEKVQA EYELLKLHLM DYYQAKKTLL EAKRKQLVDQ QLLQQVEELK ARFLVQQKHW
RSLTATYS
|
|---|
| |