Gene SbBS512_E4919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4919 
SymbolosmY 
ID6268581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp4585825 
End bp4586430 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID641728647 
Productperiplasmic protein 
Protein accessionYP_001883038 
Protein GI187733898 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.618733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGA CAAGACTGAA GATTTCGAAA ACTCTGCGGG CTGTAATGTT GACCTCTGCC 
GTCGCGACCG GCTCTGCCTA CGCGGAAAAC AACGCACAGA CTACCAATGA AAGCGCAGGG 
CAAAAAGTCG ATAGCTCTAT GAATAAAGTC GGTAATTTCA TGGATGACAG CGCCATCACC 
GCGAAAGTGA AGGCGGCGCT GGTGGATCAT GACAACATCA AGAGCACCGA TATCTCTGTC 
AAAACCGAGC AAAAAGTCGT GACCCTGAGC GGTTTCGTTG AAAGCCAGGC TCAGGCCGAA 
GAGGCAGTGA AAGTGGCGAA AGGCGTTGAA GGGGTGACCT CTGTCAGCGA CAAACTGCAC 
GTTCGCGACG CTAAAGAAGG CTCGGTGAAG GGCTACGCGG GTGACACCGC CACCACCAGT 
GAAATCAAAG CCAAACTGCT GGCGGACGAT ATCGTCCCTT CCCGTCATGT GAAAGTTGAA 
ACCACCGACG GCGTGGTTCA GCTCTCCGGT ACCGTAGATT CTCAGGCACA AAGTGACCGT 
GCTGAAAGTA TCGCCAAAGC GGTAGATGGT GTGAAAAGCG TTAAAAATGA TCTGAAAACT 
AAGTAA
 
Protein sequence
MTMTRLKISK TLRAVMLTSA VATGSAYAEN NAQTTNESAG QKVDSSMNKV GNFMDDSAIT 
AKVKAALVDH DNIKSTDISV KTEQKVVTLS GFVESQAQAE EAVKVAKGVE GVTSVSDKLH 
VRDAKEGSVK GYAGDTATTS EIKAKLLADD IVPSRHVKVE TTDGVVQLSG TVDSQAQSDR 
AESIAKAVDG VKSVKNDLKT K