| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4794 |
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| Symbol | fimH |
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| ID | 6269267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4468618 |
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| End bp | 4469520 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641728542 |
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| Product | protein FimH |
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| Protein accession | YP_001882937 |
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| Protein GI | 187734155 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGAG TTATTACCCT GTTTGCTGTA CTGCTGATGG GCTGGTCGGT AAATGCCTGG
TCATTCGCCT GTAAAACCGC CAATGGTACT GCTATCCCTA TTGGCGGTGG CAGCGCTAAT
GTTTATGTAA ACCTTGCGCC TGTCGTGAAT GTGGGGCAAA ACCTGGTCGT AGATCTTTCG
ACGCAAATCT TTTGCCATAA CGATTATCCG GAAACCATTA CAGACTATGT CACACTGCAA
CGAGGCTCGG CTTATGGCGG CGTGTTATCT AATTTTTCCG GGACCGTAAA ATATAGTGGC
AGTAGCTATC CATTTCCGAC CACCAGCGAA ACGCCGCGGG TTGTTTATAA TTCGAGAACG
GATAAGCCGT GGCCGGTGGC GCTTTATTTG ACGCCTGTGA GCAGTGCGGG CGGGGTGGCG
ATTAAAGCTG GCTCATTAAT TGCCGTGCTT ATTTTGCGAC AGACCAACAA CTATAACAGC
GATGATTTCC AGTTTGTGTG GAATATTTAC GCCAATAATG ATGTGGTGGT GCCTACTGGC
GGCTGCGATG TTTCTGCTCG TGATGTCACC GTTACTCTGC CGGACTACCC TGGTTCAGTG
CCAATTCCTC TTACCGTTTA TTGTGCGAAA AGCCAAAACC TGGGGTATTA CCTCTCCGGC
ACAACCGCAG ATGCGGGCAA CTCGATTTTC ACCAATATCG CGTCGTTTTC ACCAGCACAG
GGCGTCGGCG TACAGTTGAC GCGCAACGGT ACGATTATTC CAGCGAATAA CACGGTATCG
TTAGGAGCAG TAGGAACTTC GGCGGTAAGT CTGGGATTAA CGGCAAATTA CGCACGTACC
GGAGGGCAGG TGACTGCAGG GAATGTGCAA TCGATTATTG GCGTGACTTT TGTTTATCAA
TAA
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| Protein sequence | MKRVITLFAV LLMGWSVNAW SFACKTANGT AIPIGGGSAN VYVNLAPVVN VGQNLVVDLS
TQIFCHNDYP ETITDYVTLQ RGSAYGGVLS NFSGTVKYSG SSYPFPTTSE TPRVVYNSRT
DKPWPVALYL TPVSSAGGVA IKAGSLIAVL ILRQTNNYNS DDFQFVWNIY ANNDVVVPTG
GCDVSARDVT VTLPDYPGSV PIPLTVYCAK SQNLGYYLSG TTADAGNSIF TNIASFSPAQ
GVGVQLTRNG TIIPANNTVS LGAVGTSAVS LGLTANYART GGQVTAGNVQ SIIGVTFVYQ
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