Gene SbBS512_E4775 details

Gene Information

• Locus tag: SbBS512_E4775
• ID: 6268682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4456577
• End bp: 4457260
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641728528
• Product: putative transporter
• Protein accession: YP_001882923
• Protein GI: 187732128
• COG category: [S] Function unknown
• COG ID: [COG3314] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAC AAGGGGATGC TGTAGCCGGG GAGCTGGCGA CAGAAAAAGT GGGCATTAAA 
GGGTATCTGG CTTTTTTTCT CACCATAATC TTTTTTTCCG GTGTTTTTTC CGGAACAGAC 
AGCTGGTGGC GCGTTTTTGA TTTTTCCGTT CTGAACGGAT CGTTTGGGCA ACTGCCTGGT 
GCGAACGGAG CCACCACCTC ATTTCGCGGC GCGGGTGGTG CGGGGGCTAA AGATGGCTTT 
CTCTTTGCGC TGGAGCTGGC ACCGTCAGTC ATTCTCTCTC TGGGGATTAT TTCAATTACC 
GATGGTCTTG GTGGATTACG CGCCGCGCAG CAGTTAATGA CACCTGTGCT AAAACCGTTG 
TTGGGCATTC CAGGGATCTG CTCGCTGGCG CTGATCGCTA ACTTGCAAAA CACTGATGCC 
GCCGCCGGTA TGACCAAAGA GCTGGCGCAG GAAGGTGAAA TTACCGAACG CGATAAAGTG 
ATTTTCGCCG CATATCAAAC CAGCGGTAGC GCCATCATCA CCAACTACTT CTCTTCCGGC 
GTCGCGGTGT TCGCCTTTCT GGGCACGTCC GTAATCGTAC CTTTAGCCGT CATCCTGGTG 
TTTAAATTTG TCGGAGCCAA CATTTTGCGC GTCTGGCTTA ACTTCGAAGA ACGTCGCAAC 
CCAACGCAAG GAGCGCAAGC ATGA 

 

Protein sequence

MTQQGDAVAG ELATEKVGIK GYLAFFLTII FFSGVFSGTD SWWRVFDFSV LNGSFGQLPG 
ANGATTSFRG AGGAGAKDGF LFALELAPSV ILSLGIISIT DGLGGLRAAQ QLMTPVLKPL 
LGIPGICSLA LIANLQNTDA AAGMTKELAQ EGEITERDKV IFAAYQTSGS AIITNYFSSG 
VAVFAFLGTS VIVPLAVILV FKFVGANILR VWLNFEERRN PTQGAQA