Gene SbBS512_E4522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4522 
Symbol 
ID6270346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4229742 
End bp4230149 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content54% 
IMG OID641728307 
ProductPTS system, mannose/fructose/sorbose family, IIA component 
Protein accessionYP_001882705 
Protein GI187732005 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAATG CCATTTTTTG CGCCCACGTC AAATTAGCTT GCGCCATGCT GGAATCGGTT 
CAGATGGTGT ACGGCGACGC CAGGGTCGAG GCAGTTGAAT TTGTGCCCGG CGAGAACGCC 
GGAGACATCG TAGCAAAGCT GGGAAGGTTA GTAAGCATTC ACAATCAAGA TGAGTGGCTG 
ATTGCCGTGG ATTTACAGTG CGGCAGCCCG TGGAATGCGG CAGCGATGCT TGCGATGCGC 
AATCCTCGTC TGCGGGTAAT CAGCGGCCTT TCTCTGCCGC TGGCGCTCGA ACTGGTTGAT 
AACCAGGACA GCATGAATGT TGATGAAGTG TGTGAACACC TGACGCAAAT CGCAAAGCAA 
ACCTGCGTTG TCTGGAAACA ACTGGCAACG GCAGAGGAGG ATTTCTGA
 
Protein sequence
MVNAIFCAHV KLACAMLESV QMVYGDARVE AVEFVPGENA GDIVAKLGRL VSIHNQDEWL 
IAVDLQCGSP WNAAAMLAMR NPRLRVISGL SLPLALELVD NQDSMNVDEV CEHLTQIAKQ 
TCVVWKQLAT AEEDF