| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4443 |
|---|
| Symbol | argE |
|---|
| ID | 6269016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4154043 |
|---|
| End bp | 4155194 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641728238 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_001882651 |
|---|
| Protein GI | 187732920 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA AATTACCGCC ATTTATCGAG ATTTACCGCG CTCTGATTGC CACACCTTCA
ATAAGCGCTA CGGAAGAGGC ACTCGATCAA AGCAATGCAG ATTTAATCAC TCTGCTGGCG
GACTGGTTTA AAGATTTGGG CTTCAATGTG GAAGTGCAGC CTGTTCCAGG AACTCGCAAC
AAATTCAATA TGCTGGCAAG TATCGGACAG GGGGCTGGCG GCTTGTTGCT GGCGGGGCAT
ACCGATACGG TGCCATTTGA TGACGGTCGC TGGACGCGCG ATCCGTTTAC ACTGACGGAG
CATGACGGCA AGCTTTACGG CTTAGGCACC GCCGACATGA AAGGCTTTTT TGCGTTTATC
CTTGATGCGC TACGCGATGT CGACGTCACG AAACTGAAAA AACCGCTCTA CATTCTGGCG
ACTGCTGATG AAGAAACCAG TATGGCCGGA GCGCGTTATT TTGCCGAAAC TACCGCCCTG
CGCCCGGATT GCGCCATCAT TGGCGAACCG ACGTCACTAC AACCGGTACG CGCACATAAA
GGTCATATCT CTAACGCCAT CCGTATTCAG GGCCAGTCGG GGCACTCCAG CGATCCAGCA
CGCGGAGTTA ACGCTATCGA ACTAATGCAC GACGCCATCG GGCATATTTT GCAATTGCGC
GATAACCTGA AAGAACGTTA TCACTACGAA GCATTTACCG TGCCATACCC TACGCTCAAC
CTCGGGCATA TTCACGGTGG CGACGCTTCT AACCGTATTT GCGCTTGCTG TGAGTTGCAT
ATGGATATTC GTCCGCTGCC TGGCATGACA TTCAATGAAC TTAATGGTTT GCTCAACGAT
GCATTGGCTC CGGTGAGCGA ACGCTGGCCG GGTCGTCTGA CGGTCGACGA GCTGCATCCG
CCGATCCCTG GCTATGAATG CCCTCCGAAT CATCAACTGG TTGAAGTGGT TGAGAAATTG
CTTGGAGCAA AAACCGAAGT GGTGAATTAC TGTACCGAAG CGCCGTTTAT TCAAACGTTA
TGCCCGACGC TGGTGCTCGG TCCGGGTTCC ATCAATCAAG CTCATCAGCC TGATGAATAT
CTGGAGACGC GGTTTATTAA ACCCACCCGT GAGTTGATTA TCCAGGTAAT TCACCATTTT
TGCTGGCATT AA
|
|---|
| Protein sequence | MKNKLPPFIE IYRALIATPS ISATEEALDQ SNADLITLLA DWFKDLGFNV EVQPVPGTRN
KFNMLASIGQ GAGGLLLAGH TDTVPFDDGR WTRDPFTLTE HDGKLYGLGT ADMKGFFAFI
LDALRDVDVT KLKKPLYILA TADEETSMAG ARYFAETTAL RPDCAIIGEP TSLQPVRAHK
GHISNAIRIQ GQSGHSSDPA RGVNAIELMH DAIGHILQLR DNLKERYHYE AFTVPYPTLN
LGHIHGGDAS NRICACCELH MDIRPLPGMT FNELNGLLND ALAPVSERWP GRLTVDELHP
PIPGYECPPN HQLVEVVEKL LGAKTEVVNY CTEAPFIQTL CPTLVLGPGS INQAHQPDEY
LETRFIKPTR ELIIQVIHHF CWH
|
|---|
| |