Gene SbBS512_E4425 details

Gene Information

• Locus tag: SbBS512_E4425
• Symbol: metB
• ID: 6271447
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4129255
• End bp: 4130415
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641728222
• Product: cystathionine gamma-synthase
• Protein accession: YP_001882635
• Protein GI: 187730552
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR02080] O-succinylhomoserine (thiol)-lyase

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGTA AACAGGCCAC CATCGCAGTG CGTAGCGGGT TAAATGACGA CGAACAGTAT 
GGTTGCGTTG TCCCTCCCAT CCATCTTTCC AGCACCTATA ACTTTACCGG ATTTAATGAA 
CCGCGCGCGC ATGATTACTC GCGTCGCGGC AACCCAACGC GCGATGTGGT TCAGCGTGCG 
CTGGCAGAAC TGGAAGGCGG TGCTGGCGCA GTACTTACTA ATACCGGCAT GTCCGCGATT 
CACTTGGTCA CGACCGTCTT TTTGAAACCT GGCGATCTGC TGGTTGCGCC GCACGACTGC 
TACGGCGGTA GCTATCGCCT GTTCGACAGT CTGGTGAAAC GCGGTTGCTA TCGCGTGTTG 
TTTGTTGATC AAGGCGATGA ACAGGCATTA CGGGCAGCGC TGGCAGAAAA ACCCAAACTG 
GTACTGGTAG AAAGCCCAAG TAATCCATTG TTACGCGTCG TGGATATTGC GAAAATCTGC 
CATCTGGCAA GGGAAGTCGG GGCGGTGAGC GTGGTGGATA ACACCTTCTT AAGCCCGGCA 
TTACAAAATC CGCTGGCATT GGGTGCCGAT CTGGTGTTGC ATTCATGTAC GAAATATCTG 
AACGGTCACT CTGACGTGGT GGCTGGCGTG GTGATTGCTA AAGACCCGGA CGTTGTCACT 
GAACTTGCCT GGTGGACAAA CAATATTGGC GTGACGGGCG GCGCGTTTGA CAGCTATCTG 
CTGCTACGCG GGTTGCGAAC GCTGGTGCCG CGTATGGAGC TGGCCCAGCG CAACGCGCAG 
GCGATTGTGA AATATCTGCA AACCCAGCCG TTGGTGAAAA AACTGTATCA CCCGTCGCTG 
CCGGAAAATC AGGGGCATGA AATTGCCGCG CGCCAGCAAA AAGGCTTTGG CGCAATGTTG 
AGTTTTGAAC TGGATGGAGA TGAGCAGACG CTGCGTCGTT TCCTGGGCGG GCTGTCGTTG 
TTTACGCTGG CGGAATCATT AGGGGGAGTG GAAAGTTTAA TCTCTCACGC CGCAACCATG 
ACACATGCAG GCATGGCACC AGAAGCGCGT GCTGCCGCCG GGATCTCCGA GACGCTGCTG 
CGTATCTCCA CCGGTATTGA AGATGGCGAA GATTTAATTG CCGACCTGGA AAATGGCTTC 
CGGGCTGCAA ACAAGGGGTA A 

 

Protein sequence

MTRKQATIAV RSGLNDDEQY GCVVPPIHLS STYNFTGFNE PRAHDYSRRG NPTRDVVQRA 
LAELEGGAGA VLTNTGMSAI HLVTTVFLKP GDLLVAPHDC YGGSYRLFDS LVKRGCYRVL 
FVDQGDEQAL RAALAEKPKL VLVESPSNPL LRVVDIAKIC HLAREVGAVS VVDNTFLSPA 
LQNPLALGAD LVLHSCTKYL NGHSDVVAGV VIAKDPDVVT ELAWWTNNIG VTGGAFDSYL 
LLRGLRTLVP RMELAQRNAQ AIVKYLQTQP LVKKLYHPSL PENQGHEIAA RQQKGFGAML 
SFELDGDEQT LRRFLGGLSL FTLAESLGGV ESLISHAATM THAGMAPEAR AAAGISETLL 
RISTGIEDGE DLIADLENGF RAANKG