| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4288 |
|---|
| Symbol | pldA |
|---|
| ID | 6270760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 4005548 |
|---|
| End bp | 4006417 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641728099 |
|---|
| Product | phospholipase A |
|---|
| Protein accession | YP_001882519 |
|---|
| Protein GI | 187732481 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2829] Outer membrane phospholipase A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACTC TGCAGGGCTG GTTGTTGCCG GTGTTTATGT TGCCTATGGC AGTATATGCA
CAAGAGGCAA CGGTGAAAGA GGTGCATGAC GCGCCAGCGG TGCGTGGCAG TATTATCGCC
AATATGCTGC AGGAGCATGG CAATCCGTTC ACGCTCTATC CTTATGACAC TAACTACCTC
ATCTACACCC AAACCAGCGA TCTGAACAAA GAAGCGATTG CCAGTTACGA CTGGGCGGAA
AATGCGCGTA AGGATGAAGT AAAGTTTCAG TTGAGCCTGG CATTTCCACT GTGGCGTGGG
ATTTTAGGCC CGAACTCGGT GTTGGGTGCG TCTTATACGC AAAAATCCTG GTGGCAACTG
TCCAATAGCG AAGAGTCTTC ACCGTTTCGT GAAACCAACT ACGAACCGCA ATTGTTCCTC
GGTTTTGCCA CCGATTACCG TTTTGCAGGT TGGACGCTGC GCGATGTGGA GATGGGGTAT
AACCACGACT CTAACGGGCG TTCCGACCCG ACCTCCCGCA GCTGGAACCG CCTTTATACT
CGCCTGATGG CAGAAAACGG TAACTGGCTG GTAGAAGTGA AGCCGTGGTA TGTGGTGGGT
AATACTGACG ATAACCCGGA TATCACCAAA TATATGGGTT ACTACCAGCT TAAAATCGGC
TATCACCTCG GTGATGCGGT GTTGAGTGCG AAAGGACAGT ACAACTGGAA TACCGGTTAC
GGCGGCGCGG AGTTAGGCTT AAGTTACCCG ATCACCAAAC ATGTGCGCCT TTATACTCAG
GTTTACAGCG GCTATGGCGA ATCGCTCATC GACTATAACT TCAACCAGAC CCGTGTCGGT
GTAGGAGTTA TGCTAAACGA CTTGTTTTGA
|
|---|
| Protein sequence | MRTLQGWLLP VFMLPMAVYA QEATVKEVHD APAVRGSIIA NMLQEHGNPF TLYPYDTNYL
IYTQTSDLNK EAIASYDWAE NARKDEVKFQ LSLAFPLWRG ILGPNSVLGA SYTQKSWWQL
SNSEESSPFR ETNYEPQLFL GFATDYRFAG WTLRDVEMGY NHDSNGRSDP TSRSWNRLYT
RLMAENGNWL VEVKPWYVVG NTDDNPDITK YMGYYQLKIG YHLGDAVLSA KGQYNWNTGY
GGAELGLSYP ITKHVRLYTQ VYSGYGESLI DYNFNQTRVG VGVMLNDLF
|
|---|
| |