Gene SbBS512_E4143 details

Gene Information

• Locus tag: SbBS512_E4143
• Symbol: rep
• ID: 6269579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3864975
• End bp: 3866996
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641727970
• Product: ATP-dependent DNA helicase Rep
• Protein accession: YP_001882397
• Protein GI: 187733202
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases
• TIGRFAM ID: [TIGR01074] ATP-dependent DNA helicase Rep

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCTAA ACCCCGGCCA ACAACAAGCT GTCGAATTCG TTACCGGCCC CTGCCTGGTG 
CTGGCGGGCG CGGGTTCCGG TAAAACTCGT GTGATCACCA ATAAAATCGC CCATCTGATC 
CGCGGTTGCG GTTATCAGGC GCGACATATC GCGGCGGTGA CCTTTACCAA TAAGGCGGCG 
CGCGAGATGA AAGAGCGTGT CGGACAGACG CTGGGTCGCA AAGAGGCGCG TGGGCTGATG 
ATCTCAACCT TCCACACGCT GGGGCTGGAT ATCATCAAGC GTGAGTATGC GGCGCTGGGG 
ATGAAGGCGA ACTTTTCGCT GTTTGACGAT ACCGATCAGC TGGCGTTGCT CAAAGAGTTG 
ACCGAAGGGC TGATTGAAGA TGACAAAGTT CTCCTGCAAC AGTTGATTTC GACTATCTCT 
AACTGGAAGA ACGATCTCAA AACACCGTCC CAGGCGGCAG CCAGTGCGAT TGGCGAGCGG 
GACCGTATTT TTGCCCATTG TTATGGGCTG TATGATGCAC ACCTGAAAGC GTGCAATGTT 
CTCGACTTCG ATGATCTGAT TTTATTGCCG ACGTTGCTGC TGCAACGCAA TGAAGAAGTC 
CGCGAGCGCT GGCAGAACAA AATTCGCTAT CTGCTGGTGG ATGAGTATCA GGACACCAAC 
ACCAGCCAGT ATGAACTGGT GAAACTGCTG GTGGGCAGCC GCGCGCGCTT TACCGTGGTG 
GGCGATGACG ACCAGTCGAT CTACTCCTGG CGCGGCGCAC GTCCACAAAA CCTGGTGCTG 
CTGAGTCAGG ATTTTCCGGC GCTGAAGGTG ATTAAGCTTG AGCAGAACTA CCGCTCTTCC 
GGACGTATTT TGAAAGCGGC GAACATCCTG ATCGCCAATA ACCCGCACGT CTTTGAGAAG 
CGTCTGTTCT CCGAACTGGG TTACGGCACA GAGCTTAAAG TTTTAAGCGC GAATAACGAA 
GAACATGAAG CCGAGCGCGT CACTGGTGAA CTGATTGCGC ATCACTTCGT CAATAAAACG 
CAGTACAAAT ATTACGCTAT TCTTTATCGC GGTAACCATC AGTCGCGAGT GTTTGAAAAA 
TTCCTGATGC AAAACCGCAT CCCGTACAAA ATTTCTGGTG GTACGTCGTT TTTCTCTCGT 
CCTGAAATCA AGGACTTGCT GGCTTATCTG CGCGTGCTGA CTAACCCGGA CGATGACAGC 
GCATTTCTGC GTATCGTTAA CACGCCGAAG AGAGAGATTG GCCCGGCGAC GCTGAAAAAG 
CTGGGTGAGT GGGCGATGAC GCGCAATAAA AGCATGTTTA CCGCCAGCTT TGATATGGGC 
CTGAGTCAGA CGCTTAGCGG ACGTGGTTAT GAAGCATTGA CCCGCTTTAC TCACTGGTTG 
GCAGAAATCC AGCGTCTGGC GGAGCGGGAG CCGATTGCCG CGGTGCGCGA TCTGATCCAC 
GGCATGGATT ATGAATCCTG GCTGTACGAA ACATCGCCCA GCCCGAAAGC CGCCGAAATG 
CGCATGAAGA ACGTCAACCA ACTGTTTAGC TGGATGACGG AGATGCTGGA AGGCAGCGAA 
CTGGATGAGC CGATGACGCT CACCCAGGTG GTGACGCGCT TTACTTTGCG CGACATGATG 
GAGCGTGGTG AGAGTGAAGA AGAGCTGGAT CAGGTGCAAC TGATGACTCT GCACGCGTCA 
AAAGGGCTGG AGTTTCCTTA TGTCTACATG GTCGGTATGG AAGAAGGGTT TTTGCCGCAC 
CAGAGTAGCA TCGATGAAGA TAATATCGAT GAGGAGCGGC GGCTGGCCTA TGTCGGCATT 
ACCCGCGCCC AGAAGGAATT GACCTTTACG CTGTGTAAAG AACGCCGTCA GTACGGCGAG 
CTGGTGCGCC CGGAGCCGAG CCGCTTTTTG CTGGAGCTGC CGCAGGATGA TCTGATTTGG 
GAACAGGAGC GCAAAGTGGT CAGCGCCGAA GAACGGATGC AGAAAGGGCA AAGCCATCTG 
GCGAATCTGA AAGCGATGAT GGCGGCAAAA CGAGGGAAAT AA 

 

Protein sequence

MRLNPGQQQA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA 
REMKERVGQT LGRKEARGLM ISTFHTLGLD IIKREYAALG MKANFSLFDD TDQLALLKEL 
TEGLIEDDKV LLQQLISTIS NWKNDLKTPS QAAASAIGER DRIFAHCYGL YDAHLKACNV 
LDFDDLILLP TLLLQRNEEV RERWQNKIRY LLVDEYQDTN TSQYELVKLL VGSRARFTVV 
GDDDQSIYSW RGARPQNLVL LSQDFPALKV IKLEQNYRSS GRILKAANIL IANNPHVFEK 
RLFSELGYGT ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKYYAILYR GNHQSRVFEK 
FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLKK 
LGEWAMTRNK SMFTASFDMG LSQTLSGRGY EALTRFTHWL AEIQRLAERE PIAAVRDLIH 
GMDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM 
ERGESEEELD QVQLMTLHAS KGLEFPYVYM VGMEEGFLPH QSSIDEDNID EERRLAYVGI 
TRAQKELTFT LCKERRQYGE LVRPEPSRFL LELPQDDLIW EQERKVVSAE ERMQKGQSHL 
ANLKAMMAAK RGK