| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4055 |
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| Symbol | rfaP |
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| ID | 6272861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3787980 |
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| End bp | 3788777 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641727895 |
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| Product | lipopolysaccharide core biosynthesis protein RfaP |
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| Protein accession | YP_001882327 |
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| Protein GI | 187731319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAC TTAAAGAGCC GTTTGCCACG TTATGGCGCG GTAAAGATCC TTTTGAGGAA
GTTAAAACCT TGCAGGGTGA GGTTTTTCGT GAACTGGAAA CTCGCCGCAC TCTGCGATTT
GAAATGGCGG GCAAAAGCTA TTTTCTCAAA TGGCATCGCG GCACGACCCT GAAAGAGATA
ATCAAAAATT TACTCTCATT GCGGATGCCA GTATTAGGCG CAGACCGCGA ATGGAGTGCG
ATTCATCGAC TGCGGGATGT CGGCGTTGAT ACTATGTATG GGGTGGCATT TGGCGAAAAA
GGTATTAATC CGCTGAGCAG AACCTCGTTT ATTATTACCG AAGATCTGAC CCCAACCATC
AGTCTGGAAG ATTACTGTGC TGACTGGGCG ACTAACCCAC CAGATGTTCG CGTAAAGCGT
ATGCTTATTA AGCGTGTCGC GACGATGGTG CGTGATATGC ATGCTGCGGG CATTAACCAC
CGTGACTGTT ATATCTGTCA TTTCCTGCTG CACTTGCCTT TTTCCGGTAA GGAAGAGGAG
TTAAAAATTT CGGTAATTGA CCTACACCGG GCGCAGCTTC GCACGCGCGT TCCACGTCGT
TGGCGCGATA AAGATCTTAT AGGGCTTTAT TTTTCTTCAA TGAATATTGG CCTGACTCAG
CGGGATATCT GGCGGTTTAT GAAAGTGTAT TTTGCCGCCC CGCTTAAAGA CATTCTCAAG
CAGGAACAAG GACTGCTGTC GCAAGCAGAA GCAAAAGCCA CAAAAATCAG GGAAAGAACG
ATTCGAAAAT CGTTGTAA
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| Protein sequence | MVELKEPFAT LWRGKDPFEE VKTLQGEVFR ELETRRTLRF EMAGKSYFLK WHRGTTLKEI
IKNLLSLRMP VLGADREWSA IHRLRDVGVD TMYGVAFGEK GINPLSRTSF IITEDLTPTI
SLEDYCADWA TNPPDVRVKR MLIKRVATMV RDMHAAGINH RDCYICHFLL HLPFSGKEEE
LKISVIDLHR AQLRTRVPRR WRDKDLIGLY FSSMNIGLTQ RDIWRFMKVY FAAPLKDILK
QEQGLLSQAE AKATKIRERT IRKSL
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