Gene SbBS512_E3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3576 
Symbol 
ID6270489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3329482 
End bp3330264 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID641727446 
Producttoluene ABC transporter, permease protein 
Protein accessionYP_001881891 
Protein GI187733158 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.884023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTAA ATGCGCTGGC GTCGCTCGGA CATAAAGGGA TTAAAACCCT GAGAACGTTC 
GGGCGGGCCG GGTTAATGTT ATTCAATGCG CTGGTCGGCA AACCGGAATT TCGCAAACAT
GCGCCGCTGC TGGTGCGCCA GCTCTATAAT GTCGGCGTCC TGTCGATGCT GATTATTGTG
GTTTCTGGCG TGTTCATCGG AATGGTGTTG GGGCTGCAAG GTTATCTGGT TCTGACCACT
TATAGTGCGG AAACCAGTCT GGGTATGCTG GTGGCGTTAT CGCTACTGCG TGAACTGGGG
CCGGTGGTTG CCGCGTTGTT GTTTGCCGGG CGTGCTGGTT CGGCGCTAAC CGCAGAAATC
GGCCTGATGC GCGCTACAGA GCAACTCTCC AGTATGGAGA TGATGGCGGT GGATCCGCTG
CGTCGGGTTA TTTCTCCCCG TTTCTGGGCT GGGGTTATTT CATTACCACT GTTGACGGTT
ATTTTCGTCG CCGTGGGGAT CTGGGGCGGA TCTCTGGTCG GCGTCAGTTG GAAAGGCATT
GATAGCGGGT TCTTCTGGTC GGCAATGCAA AATGCCGTCG ACTGGCGTAT GGATCTGGTC
AACTGTCTGA TTAAGAGCGT GGTGTTCGCC ATCACGGTGA CGTGGATTTC GTTGTTTAAC
GGCTACGACG CCATCCCGAC GTCTGCCGGG ATTAGCCGGG CAACCACTCG CACCGTTGTC
CACTCGTCTC TGGCTGTTCT GGGGCTGGAT TTTGTGCTGA CCGCATTGAT GTTTGGGAAT
TGA
 
Protein sequence
MLLNALASLG HKGIKTLRTF GRAGLMLFNA LVGKPEFRKH APLLVRQLYN VGVLSMLIIV 
VSGVFIGMVL GLQGYLVLTT YSAETSLGML VALSLLRELG PVVAALLFAG RAGSALTAEI
GLMRATEQLS SMEMMAVDPL RRVISPRFWA GVISLPLLTV IFVAVGIWGG SLVGVSWKGI
DSGFFWSAMQ NAVDWRMDLV NCLIKSVVFA ITVTWISLFN GYDAIPTSAG ISRATTRTVV
HSSLAVLGLD FVLTALMFGN