Gene SbBS512_E3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3544 
Symbol 
ID6268734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3296045 
End bp3297172 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content52% 
IMG OID641727415 
ProductATPase, AFG1 family 
Protein accessionYP_001881861 
Protein GI187733258 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000306426 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGCG TTACCCCAAC ATCGCAATAC CTGAAGGCGC TCAATGAAGG CAGCCATCAA 
CCCGACGACG TTCAAAAAGA GGCCGTCAGC CGCCTGGAAA TTATTTATCA AGAACTCATC
AATAGCAGGC CACCAGCCCC CAGGACGAGT GGGCTAATGG CGCGGGTCGG TAAGCTGTGG
GGTAAACGCG AAGACACAAA GCATACGCCA GTGCGTGGCT TATATATGTG GGGCGGTGTA
GGACGCGGGA AAACCTGGCT GATGGACCTT TTCTATCAAA GCCTGCCGGG AGAGCGGAAA
CAGCGCCTGC ACTTTCACCG TTTTATGCTG CGGGTGCACG AAGAGCTAAC TGCCTTACAG
GGGCAGACCG ATCCGCTGGA AATTATTGCC GATCGCTTTA AAGCCGAAAC TGACGTGCTC
TGTTTTGACG AATTTTTTGT TTCTGATATT ACCGACGCCA TGCTACTTGG CGGTCTGATG
AAAGCCCTGT TCGCCCGCGG TATTACCCTG GTAGCGACGT CAAATATTCC GCCGGACGAA
CTTTATCGAA ATGGCTTGCA ACGTGCGCGT TTTCTGCCTG CAATCGATGC CATTAAACAG
CATTGTGATG TAATGAACGT GGACGCTGGT GTTGATTATC GACTGCGTAC ACTCACTCAG
GCGCATCTGT GGCTTTCGCC ACTCCACGAT GAAACCCGGG CACAAATGGA TAAACTATGG
TTGGCGCTGG CGGGAGCGAA ACGCGAAAAT TCACCGACGT TAGAAATCAA CCATCGACCG
CTGGCGACAA TGGGCGCTGA GAATCAGACG CTTGCTGTCT CTTTTACCAC CTTGTGTGTC
GATGCCCGCA GCCAGCATGA CTATATTGCG CTCTCACGCC TCTTTCATAC GGTCATGTTG
TTTGATGTAC CAGTTATGAC GCGGTTGATG GAGAGCGAAG CGCGGCGCTT TATTGCGCTG
GTGGATGAGT TTTACGAGCG CCATGTCAAA TTAGTGGTGA GTGCAGAAGT GCCGCTGTAT
GAAATTTATC AGGGCGATCG GCTGAAGTTT GAGTTCCAGC GTTGCCTGTC ACGTCTGCAA
GAGATGCAAA GCGAAGAGTA TCTGAAGCGC GAGCATTTGG CGGGTTAA
 
Protein sequence
MQSVTPTSQY LKALNEGSHQ PDDVQKEAVS RLEIIYQELI NSRPPAPRTS GLMARVGKLW 
GKREDTKHTP VRGLYMWGGV GRGKTWLMDL FYQSLPGERK QRLHFHRFML RVHEELTALQ
GQTDPLEIIA DRFKAETDVL CFDEFFVSDI TDAMLLGGLM KALFARGITL VATSNIPPDE
LYRNGLQRAR FLPAIDAIKQ HCDVMNVDAG VDYRLRTLTQ AHLWLSPLHD ETRAQMDKLW
LALAGAKREN SPTLEINHRP LATMGAENQT LAVSFTTLCV DARSQHDYIA LSRLFHTVML
FDVPVMTRLM ESEARRFIAL VDEFYERHVK LVVSAEVPLY EIYQGDRLKF EFQRCLSRLQ
EMQSEEYLKR EHLAG