Gene SbBS512_E3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3527 
SymboluxaA 
ID6269777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3279705 
End bp3281192 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content54% 
IMG OID641727402 
Productaltronate dehydratase 
Protein accessionYP_001881848 
Protein GI187733533 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATACA TCAAGATCCA TGCGCTGGAT AACGTCGCGG TCGCTTTAGC GGATTTGGCT 
GAAGGCACAG AAGTCAGTGT CGATAACCAG ACTGTTACGC TGCGCCAGGA TGTTGCTCGT
GGACATAAAT TTGCGTTAAC GGATATCGCA AAAGGGGCCA ATGTCATCAA ATATGGCCTG
CCGATTGGTT ATGCATTGGC GGATATTGCG GCGGGGGAAC ACGTCCACGC CCACAATACG
CGCACGAATC TGAGCGATCT GGATCAGTAT CGCTATCAAC CTGATTTTCA GGATCTGCCT
GCGCAAGCGG CAGATCGTGA AGTGCAGATC TATCGTCGCG CTAACGGCGA TGTCGGGGTG
CGTAACGAGC TGTGGATCCT GCCAACCGTG GGCTGTGTCA ACGGCATCGC GCGGCAGATC
CAGAACCGTT TTCTGAAAGA GACCAACAAC GCTGAAGGTA CCGACGGCGT GTTCCTCTTC
AGCCACACCT ACGGCTGCTC ACAGCTGGGC GACGATCACA TTAATACCCG CACCATGCTG
CAAAACATGG TGCGCCACCC GAACGCAGGC GCAGTGCTGG TGATTGGTCT GGGCTGTGAA
AACAACCAGG TTGCCGCATT CCGTGAAACG CTGGGCGATA TCGATCCTGA ACGCGTTCAT
TTCATGATCT GCCAACAGCA GGATGATGAG ATCGAAGCCG GGATCGAGCA TTTGCATCAG
CTGTATAACG TGATGCGCAA CGATAAACGC GAGCCAGGCA AACTCAGCGA ACTGAAGTTT
GGTCTGGAGT GCGGTGGTTC TGACGGTCTT TCTGGTATTA CTGCTAACCC GATGCTGGGG
CGTTTCTCTG ACTACGTGAT TTCTAACGGC GGTACTACCG TACTGACCGA AGTGCCGGAG
ATGTTTGGCG CAGAGCAGTT GCTGATGGAC CATTGCCGCG ACGAAGCAAC GTTTGAAAAA
CTGGTCACCA TGGTCAACGA CTTTAAACAG TACTTTATTG CCCATGATCA GCCGATCTAC
GAAAACCCAT CACCGGGGAA CAAAGCGGGC GGTATCACCA CGCTGGAAGA CAAATCACTT
GGCTGTACCC AGAAAGCGGG TTCCAGTGTC GTGGTTGACG TGCTGCGTTA CGGCGAGCGT
CTGAAAACGC CAGGGCTGAA CTTGTTAAGT GCGCCGGGTA ACGATGCCGT AGCGACCAGC
GCCCTAGCGG GTGCGGGCTG CCATATGGTG CTGTTCAGTA CTGGTCGCGG CACGCCATAC
GGTGGATTTG TGCCGACGGT GAAAATCGCC ACCAACAGTG AACTGGCGGC GAAGAAAAAA
CACTGGCTCG ACTTTGACGC GGGTCAGCTG ATCCACGGTA AAGCGATGCC GCAGTTGCTG
GAAGAATTTA TCGACACCAT CGTTGAGTTT GCCAACGGTA AACAAACCTG CAACGAGCGT
AACGACTTCC GCGAACTGGC GATCTTCAAA AGCGGCGTAA CGCTATAA
 
Protein sequence
MQYIKIHALD NVAVALADLA EGTEVSVDNQ TVTLRQDVAR GHKFALTDIA KGANVIKYGL 
PIGYALADIA AGEHVHAHNT RTNLSDLDQY RYQPDFQDLP AQAADREVQI YRRANGDVGV
RNELWILPTV GCVNGIARQI QNRFLKETNN AEGTDGVFLF SHTYGCSQLG DDHINTRTML
QNMVRHPNAG AVLVIGLGCE NNQVAAFRET LGDIDPERVH FMICQQQDDE IEAGIEHLHQ
LYNVMRNDKR EPGKLSELKF GLECGGSDGL SGITANPMLG RFSDYVISNG GTTVLTEVPE
MFGAEQLLMD HCRDEATFEK LVTMVNDFKQ YFIAHDQPIY ENPSPGNKAG GITTLEDKSL
GCTQKAGSSV VVDVLRYGER LKTPGLNLLS APGNDAVATS ALAGAGCHMV LFSTGRGTPY
GGFVPTVKIA TNSELAAKKK HWLDFDAGQL IHGKAMPQLL EEFIDTIVEF ANGKQTCNER
NDFRELAIFK SGVTL