Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3174 |
Symbol | srlE |
ID | 6272378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2965478 |
End bp | 2966437 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641727089 |
Product | PTS system, glucitol/sorbitol-specific, IIB component |
Protein accession | YP_001881548 |
Protein GI | 187732690 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3732] Phosphotransferase system sorbitol-specific component IIBC |
TIGRFAM ID | [TIGR00825] PTS system, glucitol/sorbitol-specific, IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGTA TTCGGATCGA AAAAGGAACG GGTGGCTGGG GCGGCCCGCT TGAGCTGGAA GCCACGCCGG GCAAAAAAAT CGTCTATATC ACCGCCGGTA CCCGGCCTGC GATTGTTGAC AAACTGGCAC AACTTACTGG CTGGCAGGCT ATTGACGGAT TTAAAGAAGG TGAACCCGCG GAGGCGGAAA TTGGTGTCGC GGTAATCGAC TGTGGCGGCA CATTACGCTG CGGCATCTAT CCGAAACGAC GTATTCCCAC CATTAATATC CACTCGACGG GCAAGTCCGG TCCGCTGGCG CAGTACATTG TGGAAGATAT TTATGTCTCT GGCGTAAAAG AAGAAAACAT CACTGTAGTG GGTGATGCGA CACCACAACC CTCTTCCGTG GGACGTGACT ATGACACCAG TAAGAAAATC ACCGAACAAA GCGATGGTTT ACTGGCGAAG GTGGGAATGG GCATGGGGTC CGCCGTTGCG GTGCTGTTTC AATCTGGTCG TGACACCATC GACACTGTAT TAAAAACCAT TCTGCCGTTT ATGGCATTCG TCTCGGCGCT CATTGGCATC ATTATGGCTT CTGGCCTTGG TGACTGGATT GCCCACGGTC TTGCTCCGCT GGCGAGCCAT CCACTGGGTC TGGTCATGCT GGCGCTCATC TGCTCCTTCC CACTGCTTTC ACCTTTCCTC GGCCCAGGCG CAGTTATCGC ACAGGTTATC GGCGTATTGA TTGGCGTGCA GATTGGTCTC GGCAATATTC CGCCGCATCT GGCTTTACCG GCACTGTTTG CCATCAACGC GCAGGCGGCC TGCGACTTCA TCCCGGTCGG TTTGTCGCTG GCGGAAGCCC GTCAGGACAC GGTTCGCGTC GGTGTCCCTT CTGTACTGGT GAGCCGCTTT TTAACCGGCG CACCGACTGT ACTGATCGCC TGGTTTGTCT CCGGTTTTAT CTATCAATAG
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Protein sequence | MTRIRIEKGT GGWGGPLELE ATPGKKIVYI TAGTRPAIVD KLAQLTGWQA IDGFKEGEPA EAEIGVAVID CGGTLRCGIY PKRRIPTINI HSTGKSGPLA QYIVEDIYVS GVKEENITVV GDATPQPSSV GRDYDTSKKI TEQSDGLLAK VGMGMGSAVA VLFQSGRDTI DTVLKTILPF MAFVSALIGI IMASGLGDWI AHGLAPLASH PLGLVMLALI CSFPLLSPFL GPGAVIAQVI GVLIGVQIGL GNIPPHLALP ALFAINAQAA CDFIPVGLSL AEARQDTVRV GVPSVLVSRF LTGAPTVLIA WFVSGFIYQ
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