| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3147 |
|---|
| Symbol | hypE |
|---|
| ID | 6271838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2938739 |
|---|
| End bp | 2939749 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641727066 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_001881525 |
|---|
| Protein GI | 187732760 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAATA TCCAACTCGC CCACGGCAGC GGCGGCCAGG CGATGCAGCA ATTAATCAAC
AGCCTGTTTA TGGAAGCCTT TGCCAACCCG TGGCTGGCAG AGCAGGAAGA CCAGGCACGT
CTTGATCTGG CGCAGCTGGT AGCAGAAGGC GATCGTCTGG CGTTCTCCAC CGACAGTTAC
GTCATTGACC CGCTGTTCTT TCCTGGCGGT AATATCGGCA AGCTGGCGAT TTGCGGCACC
GCGAATGACG TTGCGGTCAG TGGCGCTATT CCGTGCTATC TCTCCTGTGG CTTTATCCTC
GAAGAAGGAT TGCCGATGGA GACACTGAAA GCCGTAGTGA CCAGCATGGC AGAAACCGCC
CGCACGGCAG GCATTGCCAT CGTTACTGGC GATACTAAAG TGGTGCAGCG CGGCGCGGCA
GATAAACTGT TTATCAACAC CGCTGGCATG GGCGCAATTC CGGCGAATAT TCACTGGGGC
GCACAGACGC TAACCGCAGG CGATGTATTG CTGGTTAGCG GTACACTCGG CGACCACGGG
GCGACTATCC TTAACCTGCG TGAACAACTG GGGCTGGATG GTGAACTGGT CAGCGACTGC
GCGGTGCTGA CGCCGCTTAT TCAGACGCTG CGTGACATTC CCGGCGTGAA AGCGCTGCGT
GATGCCACCC GTGGTGGTGT AAACGCGGTG GTTCATGAGT TCGCGGCAGC CTGCGGTTGT
GGTATTGAAA TTTCTGAATC AGCACTGCCG GTTAAACCTG CTGTGCGCGG CGTTTGCGAA
CTGCTGGGAC TGGACGCCCT TAACTTTGCC AACGAAGGCA AACTAGTAAT AGCTGTTGAA
CGCAACGCAG CAGAGCAAGT GCTGGCAGCG TTACATTCCC ATCCACTGGG GAAAGACGCG
GCGCTAATTG GTGAAGTGGT GGAACGTAAA GGTGTTCGTC TTGCCGGTCT GTATGGTGTG
AAACGAACCC TCGATTTACC ACACGCCGAA CCGCTTCCGC GTATATGCTA A
|
|---|
| Protein sequence | MNNIQLAHGS GGQAMQQLIN SLFMEAFANP WLAEQEDQAR LDLAQLVAEG DRLAFSTDSY
VIDPLFFPGG NIGKLAICGT ANDVAVSGAI PCYLSCGFIL EEGLPMETLK AVVTSMAETA
RTAGIAIVTG DTKVVQRGAA DKLFINTAGM GAIPANIHWG AQTLTAGDVL LVSGTLGDHG
ATILNLREQL GLDGELVSDC AVLTPLIQTL RDIPGVKALR DATRGGVNAV VHEFAAACGC
GIEISESALP VKPAVRGVCE LLGLDALNFA NEGKLVIAVE RNAAEQVLAA LHSHPLGKDA
ALIGEVVERK GVRLAGLYGV KRTLDLPHAE PLPRIC
|
|---|
| |