| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3108 |
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| Symbol | queD |
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| ID | 6272966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2904427 |
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| End bp | 2904792 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641727035 |
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| Product | queuosine biosynthesis protein QueD |
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| Protein accession | YP_001881494 |
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| Protein GI | 187732204 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTCCA CCACGTTATT TAAAGATTTC ACCTTCGAAG CCGCTCACCG CTTACCACAC
GTCCCGGAAG GGCATAAATG TGGTCGCCTG CACGGGCATT CCTTTATGGT GCGACTGGAA
ATTACCGGGG AAGTCGATCC GCATACGGGC TGGATTATCG ATTTCGCTGA ACTAAAAGCG
GCGTTTAAGC CAACTTATGA GCGCCTCGAT CACCATTATC TCAATGATAT TCCAGGTCTG
GAAAACCCAA CTAGCGAAGT TTTAGCAAAA TGGATTTGGG ATCAGGTTAA ACCCGTTGTG
CCGCTGTTAA GTGCGGTGAT GGTAAAAGAA ACCTGCACCG CTGGTTGTAT CTATCGCGGC
GAATGA
|
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| Protein sequence | MMSTTLFKDF TFEAAHRLPH VPEGHKCGRL HGHSFMVRLE ITGEVDPHTG WIIDFAELKA
AFKPTYERLD HHYLNDIPGL ENPTSEVLAK WIWDQVKPVV PLLSAVMVKE TCTAGCIYRG
E
|
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