Gene SbBS512_E2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2958 
Symbol 
ID6269040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2763892 
End bp2764479 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content51% 
IMG OID641726902 
Productneutral amino-acid efflux protein 
Protein accessionYP_001881371 
Protein GI187733061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.39115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACCGA CCCTTTTAAG TGCTTTTTGG ACTTACACCC TGATTACCGC TATGACGCCA 
GGACCGAACA ATATTCTCGC CCTTAGCTCT GCTACGTCGC ATGGATTTCG TCAAAGTACC
CGCGTGCTGG CAGGGATGAG TCTGGGATTT TTGATTGTGA TGTTACTGTG TGCGGGCATT
TCATTTTCAC TGGCAGTGAT TGACCCGGCA GCGGTACACC TTTTGAGTTG GGCGGGGGCG
GCATATATTG TCTGGCTGGC GTGGAAAATC GCCACCAGCC CAACAAAGGA AGACGGACTT
CAGGCAAAAC CAATCAGCTT TTGGGCCAGC TTTGCTTTGC AGTTTGTGAA CGTCAAAATC
ATTTTGTACG GTGTTACGGC ACTGTCGACG TTTGTTCTGC CGCAAACACA GGCGCTAAGC
TGGGTAGTTG GCGTCAGCGT TTTGCTGGCG ATGATTGGGA CGTTTGGCAA TGTGTGCTGG
GCGCTGGCGG GGCATCTGTT TCAGCGATTG TTTCGCCAGT ATGGTCGCCA GTTAAATATC
GTGCTTGCCC TGTTGCTGGT CTATTGCGCG GTACGCATTT TCTATTAA
 
Protein sequence
MTPTLLSAFW TYTLITAMTP GPNNILALSS ATSHGFRQST RVLAGMSLGF LIVMLLCAGI 
SFSLAVIDPA AVHLLSWAGA AYIVWLAWKI ATSPTKEDGL QAKPISFWAS FALQFVNVKI
ILYGVTALST FVLPQTQALS WVVGVSVLLA MIGTFGNVCW ALAGHLFQRL FRQYGRQLNI
VLALLLVYCA VRIFY