Gene SbBS512_E2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2851 
SymbolgcvR 
ID6272312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp2648313 
End bp2648951 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content48% 
IMG OID641726798 
Productglycine cleavage system transcriptional repressor 
Protein accessionYP_001881271 
Protein GI187733494 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGTATG CATGTTTTTT TTATGCTTTC CTTAAGAACA ACTCACCCCT TAAAGGAATA 
ACCAGTTTGA CACTGTCATC GCAACATTAT CTGGTGATCA CTGCGTTGGG TGCCGATCGC 
CCTGGAATTG TGAACACCAT CACCCGTCAT GTCAGTAGTT GCGGCTGTAA TATTGAAGAC 
AGTCGCCTGG CTATGCTGGG AGAAGAGTTC ACGTTTATCA TGCTGCTTTC CGGTTCATGG 
AATGCCATTA CTCTGATTGA ATCAACGTTA CCGTTGAAAG GTGCCGAACT GGATCTTTTA 
ATCGTGATGA AGCGCACGAC GGCGCGTCCG CGTCCGCCAA TGCCAGCATC TGTCTGGGTT 
CAGGTCGATG TTGCAGACTC CCCGCATTTA ATTGAACGCT TCACAGCACT TTTCGACGCG 
CATCATATGA ACATTGCGGA GCTGGTGTCG CGCACGCAAC CTGCTGAAAA TGAACGGGCT 
GCGCAGTTGC ATATTCAGAT CACCGCCCAC AGCCCCGCAT CTGCGGACGC AGCAAATATT 
GAGCAAGCGT TCAAAGCCCT ATGTACAGAA CTCAATGCAC AAGGCAGTAT TAACGTCGTC 
AATTATTCCC AACATGATGA ACAGGATGGA GTTAAGTAA
 
Protein sequence
MLYACFFYAF LKNNSPLKGI TSLTLSSQHY LVITALGADR PGIVNTITRH VSSCGCNIED 
SRLAMLGEEF TFIMLLSGSW NAITLIESTL PLKGAELDLL IVMKRTTARP RPPMPASVWV 
QVDVADSPHL IERFTALFDA HHMNIAELVS RTQPAENERA AQLHIQITAH SPASADAANI 
EQAFKALCTE LNAQGSINVV NYSQHDEQDG VK