Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2748 |
Symbol | |
ID | 6268690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2551751 |
End bp | 2552989 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726709 |
Product | aminotransferase |
Protein accession | YP_001881188 |
Protein GI | 187732818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACA CTCGCCCTGA ACGTCGCTTT ACGCGCATTG ATCGTCTCCC GCCCTACGTT TTTAACATCA CCGCTGAACT GAAAATGGCT GCGCGTCGGC GCGGCGAAGA TATTATCGAT TTCAGCATGG GTAACCCGGA CGGTGCGACT CCGCCGCATA TCGTCGAAAA ATTATGTACT GTGGCCCAGC GCCCGGACAC GCATGGTTAC TCCACTTCAC GCGGCATTCC GCGGTTACGT CGCGCCATTT CCCGCTGGTA TCAGGATCGC TACGACGTTG AAATCGACCC GGAATCAGAA GCCATCGTCA CTATTGGTTC GAAAGAGGGC CTGGCGCATC TGATGCTGGC GACGCTGGAT CATGGTGACA TGGTGCTGGT GCCGAATCCA AGTTACCCGA TCCATATTTA TGGCGCGGTG ATTGCCGGGG CGCAGGTACG CTCAGTGCCG CTGGTGGAAG GTGTCGATTT CTTCAACGAA CTGGAGCGCG CCATTCGTGA AAGTTATCCG AAACCGAAGA TGATGATCCT CGGCTTCCCG TCGAATCCAA CCGCGCAATG CGTGGAGCTG GAGTTCTTCG AAAAGGTTGT GGCGCTGGCG AAACGCTACG ATGTGCTGGT GGTCCACGAC CTGGCCTATG CCGATATCGT CTACGATGGC TGGAAAGCGC CGTCAATCAT GCAGGTACCG GGTGCACGCG ATGTGGCAGT CGAGTTCTTT ACGCTGTCGA AAAGCTACAA CATGGCGGGC TGGCGTATCG GCTTTATGGT TGGCAACAAA ACGCTGGTCA GCGCCCTGGC TCGTATTAAA AGCTATCACG ATTACGGCAC CTTTACGCCG TTGCAGGTGG CGGCGATTGC GGCGCTGGAG GGCGATCAAC AGTGCGTGCG CGACATTGCC GAACAGTACA AACGCCGCCG TGATGTATTG GTTAAAGGGC TGCATGAAGC GGGCTGGATA GTTGAAATGC CGAAGGCTTC GATGTATGTC TGGGCGAAAA TACCGGAACC GTATGCTGCC ATGGGCTCGC TGGTATTTGC CAAGAAATTG CTTAACGAAG CGAAGGTCTG TGTCTCGCCG GGGATTGGCT TTGGCGACTA TGGTGATACG CATGTTCGCT TTGCACTGAT TGAAAACCGC GACCGTATTC GTCAGGCCAT CAGAGGGATT AAAGCGATGT TCCGTGCCGA CGGTTTACTA CCCGCCAGCA GCAAACATAT TCACGAAAAC GCGGAATAA
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Protein sequence | MADTRPERRF TRIDRLPPYV FNITAELKMA ARRRGEDIID FSMGNPDGAT PPHIVEKLCT VAQRPDTHGY STSRGIPRLR RAISRWYQDR YDVEIDPESE AIVTIGSKEG LAHLMLATLD HGDMVLVPNP SYPIHIYGAV IAGAQVRSVP LVEGVDFFNE LERAIRESYP KPKMMILGFP SNPTAQCVEL EFFEKVVALA KRYDVLVVHD LAYADIVYDG WKAPSIMQVP GARDVAVEFF TLSKSYNMAG WRIGFMVGNK TLVSALARIK SYHDYGTFTP LQVAAIAALE GDQQCVRDIA EQYKRRRDVL VKGLHEAGWI VEMPKASMYV WAKIPEPYAA MGSLVFAKKL LNEAKVCVSP GIGFGDYGDT HVRFALIENR DRIRQAIRGI KAMFRADGLL PASSKHIHEN AE
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