| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2717 |
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| Symbol | |
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| ID | 6269636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2516094 |
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| End bp | 2518736 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641726681 |
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| Product | fimbrial usher family protein |
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| Protein accession | YP_001881161 |
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| Protein GI | 187731011 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.405081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACC ATTCTCTTTT TCGATTACGG ATTCTTCCGT GGTGCATTGC GCTGGCAATG
TCAGGGAGTT ATAGCAGTGT CTGGGCTGAA GACGACATTC AGTTTGATTC CCGTTTTCTG
GAATTAAAAG GCGACACAAA AATTGATCTG AAGCGTTTTT CCAGCCAGGG ATATGTTGAG
CCCGGAAAAT ACAATTTACA GGTTCAACTA AATAAACAGC CATTGGCGGA AGAGTACGAT
ATTTACTGGT ATGCTGGTGA AGATGACGCG AGCAAAAGCT ATGCTTGTCT GACACCGGAA
CTGGTAGCGC AGTTTGGTTT AAAAGAAGAC GTGGCGAAAA ATCTGCAATG GAGCCACGAT
GCTAAATGCC TGAAATCCGG TCAACTGGAA GGCATGGAAA TTAAGGCTGA TTTAAGCCAG
TCCGCATTAG TCATTTCACT GCCACAGGCT TACCTCGAAT ATACTTATCC CGACTGGGAT
CCGCCTTCAC GTTGGGATGA CGGCATCTCC GGGATCGTCG CGGACTACAG CATCAACGCA
CAAACCCGGC ACGAAGAAAA TGGCGGTGAT GATAGTAACG AGATCAGCGG CAACGGGACG
GTCGGGGTTA ACCTGGGGCC GTGGCGTATG CGTGCTGACT GGCAGACTAA CTATCAACAT
ACTCGCAGTA ATGATGACGA TGAATTCAGC GGCGATGAAA CTCAAAAAAA ATGGGAGTGG
AGTCGCTACT ATGCCTGGCG GGCGTTACCA TCATTAAAAG CCAAACTGGC GCTGGGCGAG
GATTACCTCA GATCCGATAT TTTTGATGGT TTTAACTATG TTGGTGGCAG TGTCAGTACT
GACGATCAAA TGTTGCCTCC CAATCTGCGC GGCTACGCGC CAGACATTTC CGGCGTGGCA
CACACCACAG CAAAAGTGAC CGTCAGCCAG ATGGGGCGTG TGATTTACGA AACGCAGGTT
CCGGCTGGAC CGTTTCGTAT TCAGGATCTT GGTGATTCTG TCTCCGGTAC GTTGCATATT
CGCATTGAAG AACAGAACGG CCAGGTGCAG GAATATGACA TCAGCACCGC CTCGATGCCA
TACCTCACTC GTCCAGGTCA GATTCGCTAT AAGATCATGA TGGGCCGTCC GCAAGAGTGG
GGACACCATG TCGAGGGTGA ATTTTTTTCT GGTGCTGAAG CTTCCTGGGG GATCGCTAAC
GGCTGGTCGT TATATGGCGG CGCACTGGGA GATGAAAACT ATCAGTCTGC GGCGCTTGGC
GTCGGTCGCG ATTTGTCTAC ATTCGGCGCG GTCGCGTTTG ATGTTACTCA CTCGCACACC
AAACTGGATA AAGACACCGC TTATGGCAAA GGTTCGCTGG ACGGTAACTC CTTCCGTGTG
AGTTATTCCA AAGACTTTGA CCAGCTCAAC AGCCGCGTTA CTTTTGCTGG ATATCGCTTC
TCGGAAGAGA ACTTTATGAC CATGAGCGAG TATCTGGATG CCAGTGACAG CGGAATGGTA
CGCACGGGCA ACGACAAAGA GATGTACACC GCCACTTATA ACCAGAACTT CCGCGATGCG
GGTGTTTCGG TTTATCTCAA CTATACCCGC CATACCTACT GGGATCGCGA GGAGCAGATA
AACTACAACA TCATGCTCTC GCACTATTTC AATATGGGCA GTATTCGTAA TGTCAGCATC
TCGATGACTG GCTACCGTTA CGAGTATGAC AACCAGGCCG ACAAAGGCAT GTACATTTCG
CTCAGTATGC CGTGGGGCGA CAACAGTACC GTTAGCTATA ATGGTAACTA TGGCAGTGGG
ACGGACAGCA GTCAGGTCGG TTATTTCAGC CGTGTCGATG ACGCGACTCA CTATCAGTTG
AACGTCGGCA CCAGTGACAA ACACACCAGC GTTGACGGCT ATTACAGCCA TGATGGTTCG
CTGGCGCAGG TTGACCTCAG TGCGAACTAC CATGAAGGGC AATACACCTC TGCGGGCTTG
TCGTTACAGG GCGGCGCAAC GCTTACTGCC CACGGTGGCG CACTTCACCG TACCCAGAAT
ATGGGCGGGA CACGCTTGTT GATTGATGCC GATGGCGTTG CCGATGTTCC GGTGGAAGGT
AACGGGGCTG CTGTTTATAC CAATATGTTT GGTAAAGCCG TCGTTTCTGA CGTCAATAAC
TATTACCGCA ATCAGGCGTA TATCGACCTC AACAGATTGC CTGAAAACGC TGAAGCAACC
CAGTCGGTGG TGCAAGCCAC GCTAACTGAA GGTGCCATTG GCTACCGTAA ATTTGCTGTC
ATTAGCGGAC AAAAAGCGAT GGCGGTGCTG CGCCTGAGCG ACGGCAGCCA TCCTCCGTTT
GGCGCAGAAG TAAAAAATGA TAACGAGCAG ACAGTGGGCC TTGTCGATGA TGACGGCAAT
GTTTATCTGG CTGGGGTGAA ACCTGGCGAA CACATGAGTG TGTTCTGGAG TGGTGTTGCG
CATTGCGATA TCAACCTGCC GGACCCGCTG CCTGCCGATC TGTTTAACGG CTTGTTACTG
CCATGCCAGC ATAAAGGCAA TGTAGCACCT ATCACTTCGC CGGCGGTCAA ACCGGCGATT
CAGGAACAGA CACAGCGGGT GACGCCAACG GAACCTCCGA CTTCAATTTC AGTAAACCAG
TAA
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| Protein sequence | MPDHSLFRLR ILPWCIALAM SGSYSSVWAE DDIQFDSRFL ELKGDTKIDL KRFSSQGYVE
PGKYNLQVQL NKQPLAEEYD IYWYAGEDDA SKSYACLTPE LVAQFGLKED VAKNLQWSHD
AKCLKSGQLE GMEIKADLSQ SALVISLPQA YLEYTYPDWD PPSRWDDGIS GIVADYSINA
QTRHEENGGD DSNEISGNGT VGVNLGPWRM RADWQTNYQH TRSNDDDEFS GDETQKKWEW
SRYYAWRALP SLKAKLALGE DYLRSDIFDG FNYVGGSVST DDQMLPPNLR GYAPDISGVA
HTTAKVTVSQ MGRVIYETQV PAGPFRIQDL GDSVSGTLHI RIEEQNGQVQ EYDISTASMP
YLTRPGQIRY KIMMGRPQEW GHHVEGEFFS GAEASWGIAN GWSLYGGALG DENYQSAALG
VGRDLSTFGA VAFDVTHSHT KLDKDTAYGK GSLDGNSFRV SYSKDFDQLN SRVTFAGYRF
SEENFMTMSE YLDASDSGMV RTGNDKEMYT ATYNQNFRDA GVSVYLNYTR HTYWDREEQI
NYNIMLSHYF NMGSIRNVSI SMTGYRYEYD NQADKGMYIS LSMPWGDNST VSYNGNYGSG
TDSSQVGYFS RVDDATHYQL NVGTSDKHTS VDGYYSHDGS LAQVDLSANY HEGQYTSAGL
SLQGGATLTA HGGALHRTQN MGGTRLLIDA DGVADVPVEG NGAAVYTNMF GKAVVSDVNN
YYRNQAYIDL NRLPENAEAT QSVVQATLTE GAIGYRKFAV ISGQKAMAVL RLSDGSHPPF
GAEVKNDNEQ TVGLVDDDGN VYLAGVKPGE HMSVFWSGVA HCDINLPDPL PADLFNGLLL
PCQHKGNVAP ITSPAVKPAI QEQTQRVTPT EPPTSISVNQ
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