Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2639 |
Symbol | menE |
ID | 6272846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2438740 |
End bp | 2440095 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726606 |
Product | O-succinylbenzoic acid--CoA ligase |
Protein accession | YP_001881086 |
Protein GI | 187732234 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0253508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTCT CTGACTGGCC GTGGCGTCAC TGGCGGCAAG TGCGGGGAGA AGCCATCGCC TTACGTCTTA ATGACGAGCA ACTCAACTGG CGCGAGCTTT GTGCTCGCGT CGATGAGTTA GCTACGGGCT TTGCGGCGCA GGGTGTGGTT GAGGGCAGCG GCGTGATGTT GCGGGCGTGG AATACGCCGC AAACGCTGCT CGCCTGGCTG GCGTTACTGC AATGCGGGGC GCGGGTGCTG CCCGTAAATC CACAGCTTCC GCAACCGTTG CTTGAGGAAT TACTGCCAAA TCTTACACTG CAATATGCGC TGGTGCTGGA AGGAGAAAAT ACTTTCCCGG CGTTAACTTC ACTGCATATT CAGATGGTTG AAGGCACACA TTCAGCTCTG TGGCAACCAA CACGTCTTTG TTCAATGACA TTGACCTCCG GCTCCACCGG TTTACCGAAA GCCGCTGTCC ATACTTATCA GGCCCATCTT GCCAGTGCGC AAGGTGTGTT ATCGCTGATT CCGTTTGGCG ATCACGATGA CTGGTTGCTC TCTTTACCGC TGTTTCACGT CTCCGGTCAG GGAATTATGT GGCGCTGGTT ATACGCTGGT GCGCGGATGA CGGTGCGTGA TAAACAGCCA TTGGAGCAAA TGCTGGCAGG CTGTACTCAC GCTTCACTGG TGCCAACACA ACTCTGGCGT TTGCTGGTTA ACCGCAGTTC CGTTTCCCTG AAAGCGGTGT TACTTGGCGG CGCGGCTATC CCGGTCGAGT TGACGGAACA GGCGCGCGAG CAGGGGATTC GTTGCTTTTG CGGCTATGGT CTGACCGAGT TTGCCTCCAC GGTATGTGCG AAAGAAGCCG ACGGCCTGGC AGACGTTGGT TCGCCGCTGC CGGGTCGGGA AGTGAAAATC GTTAATAATG AAGTGTGGCT GCGGGCTGCC AGTATGGCAG AAGGTTACTG GCGTAACGGG CAACTGGTTT CACTGGTTAA TGACGAAGGC TGGTACGCTA CGCGCGATCG CGGTGAGATG CATAATGGCA AGCTGACCAT TGTCGGACGT TTAGACAATC TGTTATTCAG TGGCGGTGAG GGTATTCAGC CGGAAGAAGT CGAGCGTGTT ATTGCTGCAC ATCCTGCGGT TTTGCAGGTG TTTATCGTTC CCGTTGCCGA CAAGGAGTTT GGTCATCGGC CGGTAGCGGT GGTGGAGTAT GACCAGCAAA CCGTTGATCT TGGCGAATGG GTGAAAGATA AGCTGGCTCG TTTTCAACAA CCGGTGCGCT GGCTGACTTT ACCGCCGGAG CTGAAAAACG GCGGTATTAA AATTTCACGT CAGGCGCTAA AAGAGTGGGT GCAACGTCAG CAATAA
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Protein sequence | MIFSDWPWRH WRQVRGEAIA LRLNDEQLNW RELCARVDEL ATGFAAQGVV EGSGVMLRAW NTPQTLLAWL ALLQCGARVL PVNPQLPQPL LEELLPNLTL QYALVLEGEN TFPALTSLHI QMVEGTHSAL WQPTRLCSMT LTSGSTGLPK AAVHTYQAHL ASAQGVLSLI PFGDHDDWLL SLPLFHVSGQ GIMWRWLYAG ARMTVRDKQP LEQMLAGCTH ASLVPTQLWR LLVNRSSVSL KAVLLGGAAI PVELTEQARE QGIRCFCGYG LTEFASTVCA KEADGLADVG SPLPGREVKI VNNEVWLRAA SMAEGYWRNG QLVSLVNDEG WYATRDRGEM HNGKLTIVGR LDNLLFSGGE GIQPEEVERV IAAHPAVLQV FIVPVADKEF GHRPVAVVEY DQQTVDLGEW VKDKLARFQQ PVRWLTLPPE LKNGGIKISR QALKEWVQRQ Q
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