Gene SbBS512_E2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2512 
Symbol 
ID6272447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2310128 
End bp2310673 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID641726498 
Productputative cyclic diguanylate phosphodiesterase (EAL) domain 
Protein accessionYP_001880978 
Protein GI187732702 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAAT TCAGACATTT TAGTCAGCGT GCGTCGCTGA AGGATGATTT CTTACTGCAT 
ATTAATGTTT CGCCCTGGCA GTTAAACGAA CCGCACTTTC ATGAGCGTTT TACCACCATC
ATGAAAGAAA ATGGCCTGAA GGCGAACAGC CTCTGTGTTG AGATCACTGA AACCGTGATC
GAGCGAATTA ATGAACATTT TTATCTCAAT ATTGAACAAC TGCGTAAACA AGGGGTACGG
ATATCGATTG ATGACTTTGG CACCGGTTTG TCAAACCTGA AACGTTTTTA TGAAATTAAT
CCAGACAGCA TAAAGGTGGA CTCGCAATTT ACCGGCGATA TTTTCGGTAC TGCGGGAAAA
ATTGTGCGCA TTATTTTCGA TCTGGCACGC TATAACCGGA TCCCGGTGAT TGCGGAAGGC
GTAGAGAGCG AAGACGTTGC GCGCGAATTA ATTAAATTAG GATGTGTTCA GGCTCAGGGG
TATCTGTACC AGAAACCTAT GCCATTCTCC GCCTGGGATA AAAGTGGAAA ATTAGTAAAA
GAGTAG
 
Protein sequence
MGEFRHFSQR ASLKDDFLLH INVSPWQLNE PHFHERFTTI MKENGLKANS LCVEITETVI 
ERINEHFYLN IEQLRKQGVR ISIDDFGTGL SNLKRFYEIN PDSIKVDSQF TGDIFGTAGK
IVRIIFDLAR YNRIPVIAEG VESEDVAREL IKLGCVQAQG YLYQKPMPFS AWDKSGKLVK
E