Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2512 |
Symbol | |
ID | 6272447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2310128 |
End bp | 2310673 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641726498 |
Product | putative cyclic diguanylate phosphodiesterase (EAL) domain |
Protein accession | YP_001880978 |
Protein GI | 187732702 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGAAT TCAGACATTT TAGTCAGCGT GCGTCGCTGA AGGATGATTT CTTACTGCAT ATTAATGTTT CGCCCTGGCA GTTAAACGAA CCGCACTTTC ATGAGCGTTT TACCACCATC ATGAAAGAAA ATGGCCTGAA GGCGAACAGC CTCTGTGTTG AGATCACTGA AACCGTGATC GAGCGAATTA ATGAACATTT TTATCTCAAT ATTGAACAAC TGCGTAAACA AGGGGTACGG ATATCGATTG ATGACTTTGG CACCGGTTTG TCAAACCTGA AACGTTTTTA TGAAATTAAT CCAGACAGCA TAAAGGTGGA CTCGCAATTT ACCGGCGATA TTTTCGGTAC TGCGGGAAAA ATTGTGCGCA TTATTTTCGA TCTGGCACGC TATAACCGGA TCCCGGTGAT TGCGGAAGGC GTAGAGAGCG AAGACGTTGC GCGCGAATTA ATTAAATTAG GATGTGTTCA GGCTCAGGGG TATCTGTACC AGAAACCTAT GCCATTCTCC GCCTGGGATA AAAGTGGAAA ATTAGTAAAA GAGTAG
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Protein sequence | MGEFRHFSQR ASLKDDFLLH INVSPWQLNE PHFHERFTTI MKENGLKANS LCVEITETVI ERINEHFYLN IEQLRKQGVR ISIDDFGTGL SNLKRFYEIN PDSIKVDSQF TGDIFGTAGK IVRIIFDLAR YNRIPVIAEG VESEDVAREL IKLGCVQAQG YLYQKPMPFS AWDKSGKLVK E
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