Gene SbBS512_E2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2488 
Symbol 
ID6269826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2288003 
End bp2288488 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content55% 
IMG OID641726480 
Productphage protein gpU 
Protein accessionYP_001880960 
Protein GI187733342 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGG TGCTGGGATT GTACGTGTTT ATGCTGCGCA CCGTGCCGTA TCAGGAGCTG 
CAGTATCAAC GCAGCTGGCG ACATGCGGCA AACAGCCGGG TAAACCGACG CCCGTCAACG
CAGTTTCTGG GACCGGACAA CGACATGCTG ACGCTTTCTG GTGTTCTTAT GCCGGAGGTA
ACGGGCGGCA GGCTGTCGTT GCTGGCTCTG GAGCAGATGG CAGAACAGGG AAAAGCATGG
CCCCTGATTG AAGGCAGCGG CACGATTTAC GGCATGTATG TGATTGAGGG ACTGAATCAG
ACTAAAACGG AGTTTTTCCG CGACGGTATG CCGCGCCGGA TTGAGTTCAC CCTGTCGCTA
AAACGCGTGG ATGAATCCCT GTCCGATATG TTCGGTGATC TCAGTGCGCA ACTGAATAAT
CTGCAGGGAA CGGCAACATC TGCCTTAAGC GATATCAGTA AAACGGTGGG AGGGCTGCTG
TCGTGA
 
Protein sequence
MMMVLGLYVF MLRTVPYQEL QYQRSWRHAA NSRVNRRPST QFLGPDNDML TLSGVLMPEV 
TGGRLSLLAL EQMAEQGKAW PLIEGSGTIY GMYVIEGLNQ TKTEFFRDGM PRRIEFTLSL
KRVDESLSDM FGDLSAQLNN LQGTATSALS DISKTVGGLL S