Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2488 |
Symbol | |
ID | 6269826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2288003 |
End bp | 2288488 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726480 |
Product | phage protein gpU |
Protein accession | YP_001880960 |
Protein GI | 187733342 |
COG category | [R] General function prediction only |
COG ID | [COG3499] Phage protein U |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATGG TGCTGGGATT GTACGTGTTT ATGCTGCGCA CCGTGCCGTA TCAGGAGCTG CAGTATCAAC GCAGCTGGCG ACATGCGGCA AACAGCCGGG TAAACCGACG CCCGTCAACG CAGTTTCTGG GACCGGACAA CGACATGCTG ACGCTTTCTG GTGTTCTTAT GCCGGAGGTA ACGGGCGGCA GGCTGTCGTT GCTGGCTCTG GAGCAGATGG CAGAACAGGG AAAAGCATGG CCCCTGATTG AAGGCAGCGG CACGATTTAC GGCATGTATG TGATTGAGGG ACTGAATCAG ACTAAAACGG AGTTTTTCCG CGACGGTATG CCGCGCCGGA TTGAGTTCAC CCTGTCGCTA AAACGCGTGG ATGAATCCCT GTCCGATATG TTCGGTGATC TCAGTGCGCA ACTGAATAAT CTGCAGGGAA CGGCAACATC TGCCTTAAGC GATATCAGTA AAACGGTGGG AGGGCTGCTG TCGTGA
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Protein sequence | MMMVLGLYVF MLRTVPYQEL QYQRSWRHAA NSRVNRRPST QFLGPDNDML TLSGVLMPEV TGGRLSLLAL EQMAEQGKAW PLIEGSGTIY GMYVIEGLNQ TKTEFFRDGM PRRIEFTLSL KRVDESLSDM FGDLSAQLNN LQGTATSALS DISKTVGGLL S
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