| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2215 |
|---|
| Symbol | |
|---|
| ID | 6269732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2016030 |
|---|
| End bp | 2016572 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641726236 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001880721 |
|---|
| Protein GI | 187733402 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3150] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.481458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCT ATTTACACGG TTTTGACTCT AACAGTCCGG GTAACCACGA GAAAGTCTTA
CAATTGCAGT TTATTGACCC GGATGTACGC TTGATAAGCT ACAGTACGCG GCATCCGAAA
CATGATATGC AGCATCTGCT TAAAGAAGTG GACAAAATGT TGCAACTGAA CGTCGACGAG
CGTCCGCTGA TTTGCGGCGT TGGTCTGGGC GGATACTGGG CGGAACGGAT TGGTTTTCTT
TGCGATATCC GCCAGGTGAT CTTCAACCCT AATTTGTTCC CTTATGAGAA CATGGAAGGC
AAGATTGATC GCCCGGAAGA GTATGCCGAT ATTGCCACTA AGTGTGTGAC CAACTTCCGC
GAGAAGAATC GCGATCGTTG CCTGGTGATT TTGTCGCGTA ATGATGAAGC GCTTAACAGC
CAGCGGACAT CTGAAGAGTT GCATCATTAT TACGAGATTG TCTGGGACGA AGAGCAGACG
CACAAATTCA AGAATATCTC CCCGCATTTG CAGCGCATTA AAGCGTTCAA AACCCTCGGG
TAA
|
|---|
| Protein sequence | MIIYLHGFDS NSPGNHEKVL QLQFIDPDVR LISYSTRHPK HDMQHLLKEV DKMLQLNVDE
RPLICGVGLG GYWAERIGFL CDIRQVIFNP NLFPYENMEG KIDRPEEYAD IATKCVTNFR
EKNRDRCLVI LSRNDEALNS QRTSEELHHY YEIVWDEEQT HKFKNISPHL QRIKAFKTLG
|
|---|
| |