| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1979 |
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| Symbol | |
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| ID | 6272208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1806012 |
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| End bp | 1806773 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641726033 |
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| Product | N,N'-diacetylchitobiose permease IIC component |
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| Protein accession | YP_001880527 |
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| Protein GI | 187731882 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.367022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATTA TTGCCTGGGC GTTGAATACC TGGGGCACCA ACTTCCATCA GATCATTATG
GATACCATCT CAACCCCACT GGCATCGTTG GGTAGCGTGG TGGGCTGGGC CTATGTGATC
TTTGTTCCAC TGCTCTGGTT CTTCGGTATT CATGGCGCGC TGGCGCTGAC CGCACTGGAC
AACGGCATTA TGACGCCGTG GGCGCTGGAA AATATCGCGA CCTATCAGCA ATATGGTTCC
GTCGAAGCGG CGCTGGCAGC CGGTAAGACC TTCCATATCT GGGCCAAGCC GATGCTGGAC
TCCTTTATTT TCCTTGGGGG CAGTGGTGCG ACTTTAGGCC TGATCCTGGC TATCTTTATC
GCCTCTCGCC GTGCTGATTA TCGTCAGGTG GCAAAACTGG CGCTGCCGTC CGGCATCTTC
CAGATTAACG AACCGATTCT GTTTGGTCTG CCAATTATCA TGAACCCGGT GATGTTTATC
CCGTTTGTAC TGGTACAACC GATTCTGGCG GCAATCACCC TCGCAGCGTA CTACATGGGC
ATTATTCCTC CGGTGACCAA TATTGCACCG TGGACCATGC CAACCGGTCT GGGAGCCTTC
TTTAACACCA ACGGTAGCGT CGCTGCATTG CTGGTCGCAC TCTTCAACCT TGATATCGCA
ACGTTAATTT ATCTGCCCTT TGTTGTGGTG GCTAACAAAG CGCAAAACGC GATTGATAAA
GAAGAGAGCG AAGAAGATAT CGCTAACGCC CTGAAATTTT AA
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| Protein sequence | MGIIAWALNT WGTNFHQIIM DTISTPLASL GSVVGWAYVI FVPLLWFFGI HGALALTALD
NGIMTPWALE NIATYQQYGS VEAALAAGKT FHIWAKPMLD SFIFLGGSGA TLGLILAIFI
ASRRADYRQV AKLALPSGIF QINEPILFGL PIIMNPVMFI PFVLVQPILA AITLAAYYMG
IIPPVTNIAP WTMPTGLGAF FNTNGSVAAL LVALFNLDIA TLIYLPFVVV ANKAQNAIDK
EESEEDIANA LKF
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