| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1786 |
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| Symbol | mdtJ |
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| ID | 6273138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1629223 |
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| End bp | 1629588 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641725856 |
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| Product | multidrug efflux system protein MdtJ |
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| Protein accession | YP_001880354 |
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| Protein GI | 187733682 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATATTT ATTGGATTTT ATTAGGCCTG GCTATTGCTA CAGAAATTAC CGGTACGCTG
TCAATGAAAT GGGCGAGCGT CAGTGAGGGA AATGGCGGCT TTATTTTAAT GCTGGTGATG
ATTTCTCTGT CGTATATATT TCTCTCTTTC GCCGTTAAAA AGATCGCCTT AGGCGTAGCT
TATGCGCTGT GGGAAGGTAT CGGTATTTTA TTTATTACCT TGTTTAGCGT TTTGTTATTC
GACGAAAGTT TATCGCTGAT GAAAATTGCC GGGTTAACCA CCCTGGTCGC CGGGATTGTG
TTGATAAAAT CAGGTACCCG TAAAGCGCGT AAACCTGAAC TGGAGGTGAA CCATGGCGCA
GTTTGA
|
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| Protein sequence | MYIYWILLGL AIATEITGTL SMKWASVSEG NGGFILMLVM ISLSYIFLSF AVKKIALGVA
YALWEGIGIL FITLFSVLLF DESLSLMKIA GLTTLVAGIV LIKSGTRKAR KPELEVNHGA
V
|
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