Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1486 |
Symbol | trpB |
ID | 6268441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1354091 |
End bp | 1355284 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641725586 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_001880092 |
Protein GI | 187730652 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAT TACTTAACCC CTATTTTGGT GAGTTTGGCG GCATGTACGT GCCACAAATC CTGATGCCTG CTCTGCGCCA GCTGGAAGAA GCTTTTGTCA GCGCGCAAAA AGATCCTGAA TTTCAGGCTC AGTTCAACGA CCTGCTGAAA AACTATGCCG GGCGTCCAAC CGCGCTGACC AAATGCCAGA ACATTACGGC TGGGACGAAC ACCACGCTGT ATCTGAAGCG CGAAGATTTG CTGCACGGCG GCGCGCATAA AACTAACCAG GTGCTCGGTC AGGCTTTACT GGCGAAGCGG ATGGGTAAAA CCGAAATCAT CGCCGAAACC GGTGCCGGTC AGCATGGCGT GGCGTCGGCC CTTGCCAGCG CCCTGCTCGG CCTGAAATGC CGTATTTATA TGGGTGCCAA AGACGTTGAA CGCCAGTCGC CTAACGTTTT TCGTATGCGC TTAATGGGTG CGGAAGTGAT CCCGGTACAT AGCGGTTCCG CGACGCTGAA AGATGCCTGT AACGAGGCGC TGCGCGACTG GTCCGGCAGT TATGAAACCG CGCACTATAT GCTGGGCACC GCAGCTGGCC CACATCCTTA TCCGACCATT GTGTGTGAGT TTCAGCGGAT GATTGGCGAA GAAACGAAAG CGCAGATTCT GGAAAGAGAA GGTCGCCTGC CGGATGCCGT TATCGCCTGT GTTGGCGGCG GTTCGAATGC CATCGGCATG TTTGCAGATT TCATCAACGA AACCAACGTC GGCCTGATTG GTGTGGAGCC GGGTGGTCAC GGTATCGAAA CTGGCGAGCA CGGCGCACCG CTAAAACATG GTCGCGTGGG CATTTATTTC GGTATGAAAG CGCCGATGAT GCAAACCGAA GACGGGCAGA TTGAAGAATC TTACTCCATC TCCGCCGGAC TGGATTTCCC GTCTGTCGGC CCACAACACG CGTATCTTAA CAGCACTGGA CGCGCTGATT ACGTGTCTAT TACCGATGAT GAAGCCCTTG AAGCCTTCAA AACGCTGTGC CTGCACGAAG GGATTATCCC GGCGCTGGAG TCTTCCCACG CCCTGGCCCA TGCGCTGAAA ATGATGCGCG AAACCCCGGA AAAAGAGCAG CTACTGGTGG TTAACCTTTC CGGTCGCGGC GATAAAGACA TCTTCACCGT TCACGATATT TTGAAAGCAC GAGGGGAAAT CTGA
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Protein sequence | MTTLLNPYFG EFGGMYVPQI LMPALRQLEE AFVSAQKDPE FQAQFNDLLK NYAGRPTALT KCQNITAGTN TTLYLKREDL LHGGAHKTNQ VLGQALLAKR MGKTEIIAET GAGQHGVASA LASALLGLKC RIYMGAKDVE RQSPNVFRMR LMGAEVIPVH SGSATLKDAC NEALRDWSGS YETAHYMLGT AAGPHPYPTI VCEFQRMIGE ETKAQILERE GRLPDAVIAC VGGGSNAIGM FADFINETNV GLIGVEPGGH GIETGEHGAP LKHGRVGIYF GMKAPMMQTE DGQIEESYSI SAGLDFPSVG PQHAYLNSTG RADYVSITDD EALEAFKTLC LHEGIIPALE SSHALAHALK MMRETPEKEQ LLVVNLSGRG DKDIFTVHDI LKARGEI
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