Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1187 |
Symbol | wcaK |
ID | 6273121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1091858 |
End bp | 1093138 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641725319 |
Product | putative pyruvyl transferase |
Protein accession | YP_001879833 |
Protein GI | 187731153 |
COG category | [S] Function unknown |
COG ID | [COG2327] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAC TTATTCTGGG CAACCACACT TGCGGCAATC GTGGCGACAG CGCCATCTTG CGTGGCTTAC TTGATGCCAT CAATATCCTC AATCCACACG CCGAAGTGGA CGTGATGAGC CGCTATCCGG TCAGTTCTTC CTGGCTGCTC AACCGCCCGG TAATGGGCGA TCCGCTGTTC CTGCAAATGA AACAACACAA TAGCGCGGCG GGCGTTGTCG GGCGCGTTAA AAAAGTCCTC CGTCGCCGCT ATCAGCACCA GGTATTGCTC TCACGCGTCA CCGACACTGG CAAGCTGCGC AATATCACCA TCGCCCAGGG ATTCACCGAC TTCGTGCGCC TGCTGTCAGG TTACGACGCC ATTATCCAGG TCGGCGGATC GTTTTTTGTC GATCTCTATG GCGTGCCGCA GTTTGAACAT GCACTTTGCA CGTTTATGGC GAAAAAGCCG CTGTTTATGA TTGGTCACAG TGTTGGCCCG TTCCAGGATG AGCAATTTAA CCAACTGGCG AACTACGTTT TTGGTCACTG CGACGCGCTG ATCCTGCGCG AATCGGTCAG CCTTGATCTG ATGAAACGCA GCAATATCAC CACCGCAAAA GTGGAACATG GCGTCGATAC CGCGTGGCTG GTCGATCACC ACACCGAAGA TTTCACCGCC AGCTATGCCG TCCAAAACTG GCTGGACGTT GCCGCACAAC AGAAAACGGT GGCAATTACC CTGCGCGAAC TGGCACCGTT CGACAAACGT CTCGGCACCA CTCAACAAAC GTATGAAAAA GCCTTTGCCG GGGTGGTCAA TCGCATTCTC GACGAAGGGT ATCAGGTGAT TGCGCTTTCC ACCTGTACGG GCATCGACAG CTATAACAAA GACGACCGCA TGGTGGCGCT CAACCTGCGC CAGCATATCA GCGATCCTGC CCGTTACCAC GTAGTGATGG ATGAACTCAA CGATCTGGAA ATGGGCAAAA TTCTGGGGGC CTGTGAACTC ACCGTCGGTA CGCGCCTGCA CTCTGCCATT ATCTCGATGA ACTTTGCCAC TCCGGCGATT GCCATCAACT ATGAACATAA ATCCGCCGGG ATTATGCAAC AACTGGGGCT ACCAGAGATG GCAATTGATA TCCGTCATTT ATTAGACGGC AGCCTGCAAG CGATGGTTGC TGATACCTTA GGCCAGCTTC CGGCGCTGAA CACGCGACTT AACGAAGCCG TCAGTCGCGA ACGCCAGGCA GGAATGCAGA TGGTGCAATC TGTGCTTGAG CGCATCGGGG AGGCGAAATG A
|
Protein sequence | MKLLILGNHT CGNRGDSAIL RGLLDAINIL NPHAEVDVMS RYPVSSSWLL NRPVMGDPLF LQMKQHNSAA GVVGRVKKVL RRRYQHQVLL SRVTDTGKLR NITIAQGFTD FVRLLSGYDA IIQVGGSFFV DLYGVPQFEH ALCTFMAKKP LFMIGHSVGP FQDEQFNQLA NYVFGHCDAL ILRESVSLDL MKRSNITTAK VEHGVDTAWL VDHHTEDFTA SYAVQNWLDV AAQQKTVAIT LRELAPFDKR LGTTQQTYEK AFAGVVNRIL DEGYQVIALS TCTGIDSYNK DDRMVALNLR QHISDPARYH VVMDELNDLE MGKILGACEL TVGTRLHSAI ISMNFATPAI AINYEHKSAG IMQQLGLPEM AIDIRHLLDG SLQAMVADTL GQLPALNTRL NEAVSRERQA GMQMVQSVLE RIGEAK
|
| |