Gene SbBS512_E1162 details

Gene Information

• Locus tag: SbBS512_E1162
• ID: 6270752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1059091
• End bp: 1061031
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641725295
• Product: hypothetical protein
• Protein accession: YP_001879809
• Protein GI: 187732120
• COG category: [R] General function prediction only
• COG ID: [COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCCA CTTTATATAC TGCTACTGGT GAGTGCGTTA CGCCAGGCCG TGAACTGGGC 
AAAGGTGGCG AAGGCGCGGT TTATGATATC AATGAGTTTG TCGATAGCGT CGCCAAGATT 
TATCACACGC CGCCACCCGC CTTAAAACAG GACAAACTTG CCTTTATGGC TGCGACAGCT 
GACGCGCAGT TGTTGAATTA TGTCGCCTGG CCGCAGGCAA CGCTTCACGG TGGGCGAGGC 
GGAAAGGTTA TCGGTTTTAT GATGCCAAAA GTTTCTGGTA AAGAACCGAT TCATATGATC 
TATAGCCCGG CACATCGTCG CCAGAGTTAC CCTCATTGTG CGTGGGATTT TCTACTCTAT 
GTTGCGCGCA ATATTGCTTC ATCTTTTGCT ACGGTTCACG AGCACGGGCA CGTCGTGGGG 
GACGTAAACC AGAACAGCTT TATGGTAGGT CGCGACAGCA AAGTGGTGTT GATCGATAGT 
GACTCCTTTC AGATTAACGC CAATGGCACA CTGCATTTAT GCGAAGTCGG CGTGTCGCAT 
TTTACGCCGC CAGAGCTACA AACCTTGCCA TCATTTGTCG GTTTTGAACG TACCGCGAAT 
CACGATAATT TTGGCCTTGC GTTGCTGATT TTTCACGTCT TGTTTGGTGG GCGGCATCCT 
TATTCTGGTG TGCCGCTTAT CTCTGATGCG GGTAATGCGC TGGAGACGGA TATTGCCCAT 
TTCCGTTATG CCTACGCGTC AGACAACCAG CGACGTGGTT TAAAACCGCC GCCACGATCG 
ATTCCGCTGT CGATGTTACC GGGCGATGTT GAAGCCATGT TTCAGCAGGC GTTTACGGAA 
AGTGGCGTAG CAACCGGGCG TCCGACGGCT AAAGCGTGGG TAGCAGCACT GGATTCTCTA 
CGCCAACAGT TAAAGAAATG TACCGTTTCG GCAATGCATG TTTATCCCGC TCATTTGACC 
GACTGCCCGT GGTGTACGCT GGATAATCAA GGCGTTATCT ATTTTATTGA TCTCGGCGAA 
GAGGTCATTA CCACCGGCGG TGATTTTGTG CTGGCGAAAG TCTGGGCGAT GGTGATGGCG 
TCAGTAGCGC CGCCAGCATT GCAACTGCCA TTACCCGATC ATTTCCAACC GACTGGCAGG 
CCGCTTCCTT TAGGCCTGTT ACGGCGCGAA TACATCATTC TGATTGAGAT CGCACTGTCA 
GCGTTATCGC TGCTGCTTTG CGGCCTTCAG GCAGAACCGC GTTATATTAT TTTGGTTCCT 
GTGCTGGCGG CTATCTGGAT TATTGGCAGT CTGACAAGCA AAGCGTACAA AGCAGAAGTT 
CAGCAACGCC GTGAGGCATT TAATCGCGCG AAAATGGACT ATGACCATTT AGTCAGCCAG 
AGCCAACAGT TGGGCGGGCT GGAAGGTTTT ATCGCCAAAC GGACGATGCT CGAAAAAATG 
AAGGACGAAA TTCTCGGGTT ACCGGAAGAA GAAAAACGTG CTCTGGCAGC ACTTCACGAC 
ACCGCAAGGG AACGGCAGAA GCAGAAGTTT CTGGAGGGAT TTTTTATTGA TGTTGCCTCT 
ATTCCCGGCG TTGGCCCTGC GCGTAAAGCG GCGTTACGGT CCTTTGGTAT TGAAACAGCA 
GCGGATGTTA CCCGTCGTGG GGTTAAGCAA GTTAAAGGGT TTGGTGATCA TCTGACCCAG 
GCGGTCATCG ACTGGAAAGC GAGCTGTGAA CGCCGTTTTG TGTTCAGGCC GAACGAAGCG 
GTAACGCCTG CAGAAAGACA AGCGGTAATG GCGAAAATGG CCGCCAAACG ACATCGGCTG 
GAATTGGCGT TGACTGTCGG CGCGACAGAG TTGCAGCGAT TCCGCCTTCA TGCTCCAGCA 
CGGACCATGC CGTTGATGGA ACCGTTACGT CAGGCGGCAG AAAAACTGGC TCAGGCGCAG 
GCAGATTTAA GTCGCTGCTG A 

 

Protein sequence

MKPTLYTATG ECVTPGRELG KGGEGAVYDI NEFVDSVAKI YHTPPPALKQ DKLAFMAATA 
DAQLLNYVAW PQATLHGGRG GKVIGFMMPK VSGKEPIHMI YSPAHRRQSY PHCAWDFLLY 
VARNIASSFA TVHEHGHVVG DVNQNSFMVG RDSKVVLIDS DSFQINANGT LHLCEVGVSH 
FTPPELQTLP SFVGFERTAN HDNFGLALLI FHVLFGGRHP YSGVPLISDA GNALETDIAH 
FRYAYASDNQ RRGLKPPPRS IPLSMLPGDV EAMFQQAFTE SGVATGRPTA KAWVAALDSL 
RQQLKKCTVS AMHVYPAHLT DCPWCTLDNQ GVIYFIDLGE EVITTGGDFV LAKVWAMVMA 
SVAPPALQLP LPDHFQPTGR PLPLGLLRRE YIILIEIALS ALSLLLCGLQ AEPRYIILVP 
VLAAIWIIGS LTSKAYKAEV QQRREAFNRA KMDYDHLVSQ SQQLGGLEGF IAKRTMLEKM 
KDEILGLPEE EKRALAALHD TARERQKQKF LEGFFIDVAS IPGVGPARKA ALRSFGIETA 
ADVTRRGVKQ VKGFGDHLTQ AVIDWKASCE RRFVFRPNEA VTPAERQAVM AKMAAKRHRL 
ELALTVGATE LQRFRLHAPA RTMPLMEPLR QAAEKLAQAQ ADLSRC