Gene SbBS512_E1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1087 
Symbol 
ID6271782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp988791 
End bp989456 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content54% 
IMG OID641725225 
ProductIS66 Orf2 like protein 
Protein accessionYP_001879743 
Protein GI187731939 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGCCTG GCGCGCCAGT GGTCTTACAC GTCAGCAATA CTGTGAACTC AACGATATTC 
CCTTCACATC ACTTCGCAAA TGGCCGCAGG ATGTCGCAAA AGCTGAACGC CGGGCAAATG 
AACCGACCGT TCTTCCCGTT CATATTGCGC CACCACTGCA TGCTGATGTA CCACAGCCCG 
TCACGAATGA GCCAGTCACG CTCTTCCTTC CCGGTGGAGT ACGGATGTGC TGTCAGCCGT 
CACAACTTAC CGATGTCTTC AGGGCACTCA AATATGCTCA GTCCTGATAA TGTCTTCATC 
GCAATTAAAC CTGTTGACAT GCGCCGGGGC ATCGACTCAC TGACGCAGTA TATACAGGAT 
GAACTCCGGT CGACATGGCA TGAGGGAGCC GCCTTCGTCT TTGTTAACAA AGCCCGTTCG 
CGTATCAAAG TTCTCCGGTG GGATAAACAC GGGGTGTGGT TGTGTACCCG CCGTCTGCAC 
AAAGGCAGCT TCCGCTGGCC ACGTGCAAAT GACGCTGCCT GGCACCTCAC TCCCGACGAG 
TTTAACTGGC TGATTGCCGG TGTTGACTGG CAGCAGGTTA AGGGACATGA CCTGACGAAA 
TGGGTCTGGC TGAATGAACC TGAACTGCGC CCTGAAAACA CGCAAAATAC ACTGCTAACT 
CAGTGA
 
Protein sequence
MLPGAPVVLH VSNTVNSTIF PSHHFANGRR MSQKLNAGQM NRPFFPFILR HHCMLMYHSP 
SRMSQSRSSF PVEYGCAVSR HNLPMSSGHS NMLSPDNVFI AIKPVDMRRG IDSLTQYIQD 
ELRSTWHEGA AFVFVNKARS RIKVLRWDKH GVWLCTRRLH KGSFRWPRAN DAAWHLTPDE 
FNWLIAGVDW QQVKGHDLTK WVWLNEPELR PENTQNTLLT Q