Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0875 |
Symbol | |
ID | 6268555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 817657 |
End bp | 818175 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641725040 |
Product | phage tail fiber repeat protein |
Protein accession | YP_001879567 |
Protein GI | 187730574 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.872815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACG CAAGCCTTAC AACTAAAGGT GTTGTGAAAC TTAGCAGTGC TGTTGATAGC ACCAGTGAAT CGCTGGCCGC AACGCCAAAA GCAGTTAAAG CAGCCAATGA CAATGCGAAT AGCAGGGTGC CATCTAACCG AAAAGTTAAC GGAAAAGCAT TGACTGCGGA TATAACATTA ACGCCGAAAG ATATTGGTAC TTTAAATTCA GTAACGATGT CTTTCTCTGG CGGGGCTGGG TGGTTCAAAC TGGCTACGGT TACCATGCCA CAAGCGAGTT CCATCGTTTA CATCGCATTG ATTGGTGGCG CTGGTTACAA CGTCGGTTCC CCACATCAGG CAGGCATTTC AGAACTGGTT CTACGAGCAG GCAATGGAAA CCCCAAAGGA ATTACCGGGG CTTTGTGGAA GCGTACAGCC GTCGGATTAA CGAATTTCGC CTGGATCAAC ACATCCGGCG ATACATATGA TATTTACGTT GAGATTGGCA ATTATGCGGT AATGACTCCA ACTTATTGA
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Protein sequence | MEDASLTTKG VVKLSSAVDS TSESLAATPK AVKAANDNAN SRVPSNRKVN GKALTADITL TPKDIGTLNS VTMSFSGGAG WFKLATVTMP QASSIVYIAL IGGAGYNVGS PHQAGISELV LRAGNGNPKG ITGALWKRTA VGLTNFAWIN TSGDTYDIYV EIGNYAVMTP TY
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