Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0774 |
Symbol | |
ID | 6271671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 724799 |
End bp | 726559 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724956 |
Product | putative helicase |
Protein accession | YP_001879483 |
Protein GI | 187730194 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0469791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTTA CACTCCGCCC ATATCAGCAA GAAGCCGTGG ATGCCACGCT CAACCATTTT CGTCGTCATA AAACCCCTGC CGTTATCGTG CTGCCCACCG GCGCAGGTAA AAGCCTGGTG ATTGCCGAAC TGGCACGGCT GGCGCGTGGT CGTGTTCTGG TGCTGGCACA CGTCAAAGAA CTGGTGGCGC AAAACCATGC AAAGTATCAG GCGCTGGGGC TGGAAGCCGA TATTTTTGCC GCTGGGTTAA AGCGCAAAGA GAGCCACGGT AAAGTGGTAT TTGGCAGCGT GCAGTCGGTC GCTCGTAATC TTGATGCCTT TCAGGGTGAA TTTTCGCTGT TGATTGTCGA TGAATGCCAC CGTATTGGTG ACGATGAAGA GAGCCAGTAT CAGCAAATCC TCACTCACCT GACTAAAGTG AATCCCCACT TACGCCTGCT GGGGCTGACT GCCACGCCTT TTCGATTGGG CAAAGGCTGG ATCTACCAGT TCCATTATCA CGGCATGGTA CGCGGCGATG AGAAAGCCCT TTTCCGTGAC TGCATTTATG AGCTGCCGCT GCGTTATATG ATTAAACACG GCTATCTGAC GCCGCCAGAA CGACTGGATA TGCCAGTAGT GCAATACGAT TTCAGCCGCT TGCAGGCACA GAGTAACGGG CTGTTCAGCG AAGCTGATCT CAACCGTGAG CTGAAAAAAC AGCAACGCAT TACGCCACAT ATCATCAGCC AGATCATGGA GTTCGCCGAA AAGCGCAAAG GGGTAATGAT TTTCGCCGCC ACCGTTGAAC ACGCAAAAGA GATTGTGGGA TTACTGCCTG CCGAAGATGC AGCACTGATT ACTGGCGACA CCCCCGGCGC TGAGCGCGAT GTGTTAATTG AAGATTTTAA AGCCCAGCGT TTTCGCTATC TGGTCAACGT CGCGGTACTG ACCACCGGAT TTGACGCCCC GCACGTCGAT CTTATCGCCA TTCTGCGTCC TACCGAATCA GTGAGTCTTT ACCAACAAAT TGTCGGGCGC GGTCTGCGTC TCGCTCCTGG CAAGACTGAT TGCTTAATTC TTGATTATGC GGGTAATCCT CACGACCTCT ACGCGCCGGA AGTTGGTACA CCGAAAGGCA AAAGTGACAA CGTCCCGGTA CAGGTTTTCT GCCCTGCCTG CGGTTTTGCC AACACCTTTT GGGGGAAAAC GACCGCCGAC GGGACATTGA TTGAACACTT TGGTCGTCGC TGTCAGGGAT GGTTTGAAGA TGACGACGGC CATCGCGAAC AGTGTGACTT CCGTTTCCGT TTTAAAAATT GCCCGCAATG TAACGCGGAA AACGATATTG CCGCCCGCCG CTGCCGCGAA TGTGACACGG TACTGGTTGA TCCGGATGAT ATGTTAAAAG CGGCGCTACG ACTGAAAGAC GCGCTGGTAT TACGCTGTAG CGGCATGTCT TTACAGCATG GGCACGACGA GAAAGGCGAA TGGTTGAAAA TCACCTATTA CGATGAAGAC GGCGCGGATG TGAGTGAGCG TTTCCGTCTG CAAACGCCCG CCCAGCGAAC TGCCTTCGAG CAGCTTTTTA TCCGCCCGCA TACGCGCACA CCGGGCATCC CTCTGCGCTG GATCACCGCC GCCGATATCC TCGCCCAGCA AGCCTTACTG CGACATCCGG ATTTTGTCGT CGCCCGCATG AAAGGTCAGT ACTGGCAGGT GCGTGAAAAA GTGTTCGATT ACGAAGGTCG TTTTCGTCGG GCGCACGAAT TACGCGGTTA A
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Protein sequence | MIFTLRPYQQ EAVDATLNHF RRHKTPAVIV LPTGAGKSLV IAELARLARG RVLVLAHVKE LVAQNHAKYQ ALGLEADIFA AGLKRKESHG KVVFGSVQSV ARNLDAFQGE FSLLIVDECH RIGDDEESQY QQILTHLTKV NPHLRLLGLT ATPFRLGKGW IYQFHYHGMV RGDEKALFRD CIYELPLRYM IKHGYLTPPE RLDMPVVQYD FSRLQAQSNG LFSEADLNRE LKKQQRITPH IISQIMEFAE KRKGVMIFAA TVEHAKEIVG LLPAEDAALI TGDTPGAERD VLIEDFKAQR FRYLVNVAVL TTGFDAPHVD LIAILRPTES VSLYQQIVGR GLRLAPGKTD CLILDYAGNP HDLYAPEVGT PKGKSDNVPV QVFCPACGFA NTFWGKTTAD GTLIEHFGRR CQGWFEDDDG HREQCDFRFR FKNCPQCNAE NDIAARRCRE CDTVLVDPDD MLKAALRLKD ALVLRCSGMS LQHGHDEKGE WLKITYYDED GADVSERFRL QTPAQRTAFE QLFIRPHTRT PGIPLRWITA ADILAQQALL RHPDFVVARM KGQYWQVREK VFDYEGRFRR AHELRG
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