Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0660 |
Symbol | tolR |
ID | 6268984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 630704 |
End bp | 631132 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641724856 |
Product | colicin uptake protein TolR |
Protein accession | YP_001879395 |
Protein GI | 187734066 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000013266 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGAG CGCGTGGACG AGGTCGTCGC GAACTTAAGT CCGAAATCAA CATTGTACCG TTGCTGGACG TACTGCTGGT GCTGTTGCTG ATCTTCATGG CGACAGCGAC CATCATCACC CAGAGCGTGG AGGTCGATCT GCCAGACGCT ACTGAATCAC AGGCGGTGAG CAGTAACGAT AATCCGCCAG TGATTGTTGA AGTGTCTGGT ATTGGTCAGT ACACCGTGGT GGTTGAGAAA GATCGCCTGG AGCGTTTACC ACCAGAGCAG GTGGTGGCGG AAGTGTCCAG CCGTTTCAAG GCCAACCCGA AAACGGTCTT TCTGATCGGT GGCGCAAAAG ATGTGCCTTA CGATGAAATA ATTAAAGCAC TGAACTTGTT ACATAGTGCG GGTGTGAAAT CGGTTGGTTT AATGACGCAG CCTATCTAA
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Protein sequence | MARARGRGRR ELKSEINIVP LLDVLLVLLL IFMATATIIT QSVEVDLPDA TESQAVSSND NPPVIVEVSG IGQYTVVVEK DRLERLPPEQ VVAEVSSRFK ANPKTVFLIG GAKDVPYDEI IKALNLLHSA GVKSVGLMTQ PI
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