| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0635 |
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| Symbol | |
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| ID | 6272173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 605033 |
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| End bp | 607534 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641724832 |
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| Product | fimbrial usher family protein |
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| Protein accession | YP_001879371 |
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| Protein GI | 187731046 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGCGC TATCGCCGCC TTTCATAAAA TATTTATCAG GTATGGACAC CGTGAATATT
TATCGACTCT CTTTTGTATC CTGCCTGGTC GTGGCGATGC CTTGCGCATT GGCGGTCGAA
TTCAACCTTA ATGTTCTCGA TAAATCGATG CGCGACCGCA TTGATATTTC ATTATTAAAG
GAAAAAGGAG TCATTGCTCC CGGTGAGTAT TTTGTTAGCG TTGCGGTAAA TAATAACCAA
ATCAGTAACG GGCAAAAGAT TAACTGGCAC AAAAATGACG ATAAAACCAT TCCGTGCATC
AATGATTTAC TGGTCGATAA ATTTGGCTTA AAACCTGAAG TCCGTCAGTC GTTACCATTG
ATAAATCAGT GCGTCGATTT TAGCTCCCGA CCTGAAATGC TCTTCAATTT CGATCAAGCC
AATCAGCAAC TGAATATTAG TATTCCGCAA GCCTGGCTGG CGTGGCACTC AGAAAACTGG
CCCCCACCCT CCACATGGAA AGAAGGTGTC GCCGGTGTCC TGATGGATTA CAACTTGTTT
GCCAGCAGCT ACCGCCCACA GGATGGCAGC AGCAGCACTA ATCTTAACGC CTATGGAACA
GCCGGAATCA ACACGGGGGC ATGGCGCTTA CGCAGTGATT ATCAGTTGAA TCAGACTGAT
AGCGATGATA ACCATGAACA GTCAGGCGAA ATATCACGTA CCTATCTTTT TCGCCCGTTA
CCGCAATTAG GTTCAAAATT AACCCTCGGC GAAACGGATT TTAGTTCCAA TATTTTCGAC
GGTTTTTCTT ATACCGGTGC GGCACTGGCA AGTGACGATC GAATGTTGCC ATGGGAACTA
CGCGGCTACG CCCCACAAAT TAGCGGTATT GCACAGACCA ATGCCACGGT GACGATCAGT
CAATCAGGCC GCGTCATTTA CCAGAAAAAA GTCCTACCAG GCCCATTTAT CATTGACGAC
CTTAATCAGT CTGTTCAGGG CACACTGGAT GTCAAAGTGA CGGAAGAAGA TGGTCGGGTG
AACAATTTCC AGGTTTCGGC AGCATCGACG CCCTTCCTGA CTCGTCAGGG ACAGGTTCGC
TATAAACTGG CCGCGGGTCA GCCACGGCCC TCCATGTCAC ATCAAACTGA AAATGAAACC
TTTTTTAGCA ATGAAGTTTC CTGGGGGATG CTGTCAAACA CCTCGCTGTA CGGCGGCCTG
CTGCTTTCTG GTGATGACTA CCATTCTGCC GCAATGGGTA TTGGGCAAAA TATGCTGTGG
CTTGGTGCGC TGTCGTTTGA TGTCACGTGG GCCAGTAGCC ATTTTGATAC TCAGCAGGAC
GAGCGGGGCT TAAGCTACCG TTTTAATTAC AGCAAACAAG TGGATGCCAC TAACAGCACG
ATTTCCCTCG CCGCTTATCG TTTCTCCGAT CGTCATTTTC ACAGCTACGC CAACTATCTG
GATCACAAAT ACAACGACAG CGATGCGCAG GACGAAAAAC AGACGATCAG CTTATCTGTG
GGCCAACCGA TTACCCCACT AAACCTCAAT CTTTACGCCA ACCTGCTACA TCAAACCTGG
TGGAATGCAG ACGCCTCCAC GACCGCCAAC ATCACGGCAG GTTTTAATGT TGATATTGGT
GACTGGAGAG ATATCTCTAT TTCGACGTCA TTCAATACAA CCCATTACGA AGATAAAGAT
CACGACAACC AGATTTACCT GTCGATTTCG CTCCCCTTCG GTAACGGTGG TCGGGTTGGC
TATGACATGC AAAACAGTAG CCACAGCACC ACACACCGCA TGTCGTGGAA CGATACGCTG
GATGAACGTA ATAGCTGGGG CATGTCTGCC GGACTGCAAT CCGACCGTCC TGACAATGGA
GCCCAGGTGA GCGGCAACTA TCAGCACCTG AGTTCAGCGG GTGAGTGGGA TATTTCTGGT
ACCTATGCCG CCAATGATTA CAGTTCCGTC AGCAGCAGCT GGAGCGGTTC TTTCACCGCA
ACCCAATATG GTGCAGCGTT TCATCGCCAC AGCTCCACCA ATGAACCACG CCTGATGGTC
AGCACCGATG GCGTGGCAGA TATTCCGGTT CAGGGCAATC TCGACTACAC CAACCATTTT
GGCATTGCGG TGGTACCGTT GATTTCCAGT TACCAGCCTT CCACCGTGGC GGTGAACATG
AATGACTTAC CCGACGGCGT AACAGTTGCA GAAAACGTTA TCAAAGAAAC GTGGATTGAA
GGCGCGATAG GTTACAAATC ACTGGCTTCC CGTTCCGGTA AAGACGTTAA CGTCATCATT
CGCAACGCCA GCGGTCAGTT TCCTCCCCTC GGAGCGGATA TCCGCCAGGA TGACAGCGGC
ATTAGCGTGG GGATGGTTGG CGAGGAAGGA CATGCCTGGT TAAGCGGAGT CGCTGAAAAT
CAAAAGTTTA CCGTGGTCTG GGGTGATAAC CAGCATTGCT CGCTCCATCT TCCTGAACAT
ATGGAAGACA CCGCAAATCG CCTGATTTTA CCTTGTCATT AA
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| Protein sequence | MAALSPPFIK YLSGMDTVNI YRLSFVSCLV VAMPCALAVE FNLNVLDKSM RDRIDISLLK
EKGVIAPGEY FVSVAVNNNQ ISNGQKINWH KNDDKTIPCI NDLLVDKFGL KPEVRQSLPL
INQCVDFSSR PEMLFNFDQA NQQLNISIPQ AWLAWHSENW PPPSTWKEGV AGVLMDYNLF
ASSYRPQDGS SSTNLNAYGT AGINTGAWRL RSDYQLNQTD SDDNHEQSGE ISRTYLFRPL
PQLGSKLTLG ETDFSSNIFD GFSYTGAALA SDDRMLPWEL RGYAPQISGI AQTNATVTIS
QSGRVIYQKK VLPGPFIIDD LNQSVQGTLD VKVTEEDGRV NNFQVSAAST PFLTRQGQVR
YKLAAGQPRP SMSHQTENET FFSNEVSWGM LSNTSLYGGL LLSGDDYHSA AMGIGQNMLW
LGALSFDVTW ASSHFDTQQD ERGLSYRFNY SKQVDATNST ISLAAYRFSD RHFHSYANYL
DHKYNDSDAQ DEKQTISLSV GQPITPLNLN LYANLLHQTW WNADASTTAN ITAGFNVDIG
DWRDISISTS FNTTHYEDKD HDNQIYLSIS LPFGNGGRVG YDMQNSSHST THRMSWNDTL
DERNSWGMSA GLQSDRPDNG AQVSGNYQHL SSAGEWDISG TYAANDYSSV SSSWSGSFTA
TQYGAAFHRH SSTNEPRLMV STDGVADIPV QGNLDYTNHF GIAVVPLISS YQPSTVAVNM
NDLPDGVTVA ENVIKETWIE GAIGYKSLAS RSGKDVNVII RNASGQFPPL GADIRQDDSG
ISVGMVGEEG HAWLSGVAEN QKFTVVWGDN QHCSLHLPEH MEDTANRLIL PCH
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