Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0334 |
Symbol | nrdR |
ID | 6273162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 327176 |
End bp | 327625 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641724572 |
Product | transcriptional regulator NrdR |
Protein accession | YP_001879122 |
Protein GI | 187731428 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.402323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTGCC CATTCTGTTT CGCCGTGGAC ACTAAGGTAA TTGACTCTCG TCTCGTGGGC GGGGGTTCAT CCGTACGCCG CCGTCGGCAG TGTCTGGTGT GTAATGAACG TTTCACCACC TTTGAAGTGG CGGAGCTGGT TATGCCGCGT GTTGTAAAAA GCAACGACGT GCGTGAACCG TTTAATGAAG AGAAATTGCG TAGCGGAATG CTGCGGGCGC TGGAAAAACG TCCGGTGAGT TCCGATGACG TTGAAATGGC AATCAATCAT ATTAAATCGC AGCTGCGCGC CACCGGTGAG CGCGAAGTAC CGAGCAAGAT GATTGGCAAT CTGGTGATGG AGCAATTGAA AAAGCTCGAT AAAGTCGCCT ATATCCGTTT TGCCTCTGTC TACCGCAGTT TCGAAGATAT CAAAGAATTT GGCGAAGAGA TCGCGCGCCT GGAGGACTAA
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Protein sequence | MHCPFCFAVD TKVIDSRLVG GGSSVRRRRQ CLVCNERFTT FEVAELVMPR VVKSNDVREP FNEEKLRSGM LRALEKRPVS SDDVEMAINH IKSQLRATGE REVPSKMIGN LVMEQLKKLD KVAYIRFASV YRSFEDIKEF GEEIARLED
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