Gene SbBS512_E0233 details

Gene Information

• Locus tag: SbBS512_E0233
• Symbol: prfH
• ID: 6270782
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 240478
• End bp: 241092
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641724480
• Product: peptide chain release factor-like protein
• Protein accession: YP_001879031
• Protein GI: 187732116
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR03072] putative peptide chain release factor H

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTTGC TACAACTCTC CTCAGCGCAG GGGCCGGAAG AATGTTGTCT CGCAGTGAAA 
AAGGCGCTGG ACAGGCTAAT TAAAGAAGCT GCCCGACAAG ACGTCGCGGT AACGGTGTTG 
GAAACAGAAA CGGGCCGCTA CTCTGACACG CTGCGTTCAG CTCTGGTTTC TCTGGATGGC 
GATAACGCAT GGGCATTAAG CGAAAGCTGG TGTGGCACTA TTCAGTGGAT TTGTCCGAGT 
CCGTATCGGC CTCATCATGG GCGCAAAAAC TGGTTTCTGG GCATTGGGCG TTTTACCGCT 
GATGAGCAGG AGCAATCCGA TGCGATCCGG TATGAGACGC TGCGTTCGTC GGGGCCGGGC 
GGTCAACATG TCAATAAAAC CGACTCGGCG GTACGCGCCA CGCATTTGGC ATCCGGTATT 
AGCGTGAAGG TTCAGTCAGA GCGTAGTCAG CATGCTAACA AGCGGCTGGC ACGATTGCTG 
ATTGCCTGGA AGCTGGAGCA GCAGCAACAG GAAAATAGCG CGGTGCTGAA ATCGCAGCGG 
CGAATGTTCC ATCACCAGAT TGAACGTGGC AACCCGAGAC GGACATTTAC AGGGATGGCT 
TTTATCGAAG GATAA 

 

Protein sequence

MILLQLSSAQ GPEECCLAVK KALDRLIKEA ARQDVAVTVL ETETGRYSDT LRSALVSLDG 
DNAWALSESW CGTIQWICPS PYRPHHGRKN WFLGIGRFTA DEQEQSDAIR YETLRSSGPG 
GQHVNKTDSA VRATHLASGI SVKVQSERSQ HANKRLARLL IAWKLEQQQQ ENSAVLKSQR 
RMFHHQIERG NPRRTFTGMA FIEG