| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0137 |
|---|
| Symbol | sfsA |
|---|
| ID | 6269499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 147852 |
|---|
| End bp | 148556 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641724390 |
|---|
| Product | sugar fermentation stimulation protein A |
|---|
| Protein accession | YP_001878949 |
|---|
| Protein GI | 187732996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
|---|
| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000754375 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCT CTCCCCCTCT ACAGCGCGCG ACGCTAATTC AGCGTTACAA ACGTTTTTTA
GCCGATGTGA TCACACCCGA TGGTCGCGAA TTAACGCTAC ACTGCCCGAA TACGGGTGCG
ATGACCGGTT GTGCAACGCG TGGCGATACC GTCTGGTATT CGACTTCAGA CAACACCAAA
CGGAAATACC CACACACCTG GGAACTAACT CAAAGCCAGA GCGGCGCATT TATTTGCGTC
AATACGCTTT GGGCTAACAG GTTGACGAAA GAGGCTATCC TTAATGAATC AATTTCAGAA
CTGTCAGGCT ATAGCTCGCT GAAAAGCGAA GTAAAATATG GCGCAGAACG CAGCCGTATT
GACTTTATGT TGCAGGCGGA TTCGCGTCCA GACTGCTATA TTGAAGTGAA ATCGGTTACG
TTAGCGGAGA ACGAACAGGG ATATTTTCCC GATGCGGTCA CTGAACGAGG TCAGAAACAC
CTTCGGGAGT TGATGAACGT AGCGGCTGAA GGCCTGCGTG CGGTTATCTT TTTCGCCGTG
CTGCATTCAG CCATTACACG GTTTTCACCC GCGCGCCACA TCGATGAGAA ATACGCGCAA
CTATTGTCAG AAGCTCAACA GAGGGGGGTA GAAATTCTGG CTTACAAAGC GGAAATTTCT
GCTGAAAGCA TGGCTCTTAA AAAATCACTG CCGGTTACAT TGTAG
|
|---|
| Protein sequence | MEFSPPLQRA TLIQRYKRFL ADVITPDGRE LTLHCPNTGA MTGCATRGDT VWYSTSDNTK
RKYPHTWELT QSQSGAFICV NTLWANRLTK EAILNESISE LSGYSSLKSE VKYGAERSRI
DFMLQADSRP DCYIEVKSVT LAENEQGYFP DAVTERGQKH LRELMNVAAE GLRAVIFFAV
LHSAITRFSP ARHIDEKYAQ LLSEAQQRGV EILAYKAEIS AESMALKKSL PVTL
|
|---|
| |