| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0124 |
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| Symbol | panD |
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| ID | 6272602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 137729 |
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| End bp | 138109 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641724378 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_001878937 |
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| Protein GI | 187732926 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCGCA CGATGCTGCA GGGCAAACTC CACCGCGTGA AAGTGACTCA TGCGGACCTG
CACTATGAAG GTTCTTGCGC CATTGACCAG GATTTTCTTG ACGCAGCCGG TATTCTCGAA
AACGAAGCCA TTGATATCTG GAATGTCACC AACGGCAAGC GTTTCTCCAC TTATGCCATC
GCGGCAGAAC GCGGTTCGAG AATTATTTCT GTTAACGGTG CGGCGGCCCA CTGCGCCAGT
GTCGGCGATA TTGTCATCAT CGCCAGCTTC GTTACCATGC CAGATGAAGA AGCTCGCACC
TGGCGACCCA ACGTCGCCTA TTTTGAAGGC GACAATGAAA TGAAACGTAC CGCGAAAGCG
ATTCCGGTAC AGGTTGCTTG A
|
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| Protein sequence | MIRTMLQGKL HRVKVTHADL HYEGSCAIDQ DFLDAAGILE NEAIDIWNVT NGKRFSTYAI
AAERGSRIIS VNGAAAHCAS VGDIVIIASF VTMPDEEART WRPNVAYFEG DNEMKRTAKA
IPVQVA
|
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