Gene SbBS512_E0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0113 
SymbolspeD 
ID6272978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp126412 
End bp127206 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content46% 
IMG OID641724369 
ProductS-adenosylmethionine decarboxylase 
Protein accessionYP_001878928 
Protein GI187732458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000197451 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAC TGAAACTGCA TGGCTTTAAT AATCTGACCA AAAGTCTGAG TTTTTGTATT 
TACGATATCT GCTACGCCAA AACTGCCGAA GAGCGCGACG GTTATATTGC TTATATCGAT
GAACTCTATA ATGCCAACCG TCTGACCGAA ATCCTGTCAG AAACCTGTTC CATTATCGGG
GCCAATATTC TTAACATCGC CCGCCAGGAT TACGAACCAC AGGGTGCCAG CGTCACTATT
CTGGTGAGTG AAGAACCGGT TGACCCGAAA CTCATCGACA AAACAGAACA CCCCGGCCCA
CTGCCAGAAA CGGTCGTTGC CCATCTCGAT AAAAGTCATA TTTGCGTACA TACCTACCCG
GAAAGCCATC CTGAAGGTGG TTTATGTACC TTCCGCGCCG ATATTGAAGT CTCTACCTGC
GGCGTGATTT CTCCGCTGAA GGCGCTGAAT TACCTGATCC ACCAGCTTGA GTCCGATATC
GTAACCATTG ATTATCGCGT GCGCGGTTTT ACCCGCGACA TTAACGGTAT GAAGCACTTT
ATCGACCATG AGATTAATTC GATTCAGAAC TTTATGTCTG ACGATATGAA GGCGCTGTAT
GACATGGTGG ATGTAAACGT CTATCAGGAA AATATCTTCC ATACCAAGAT GTTGCTTAAA
GAGTTCGACC TTAAGCACTA CATGTTCCAC ACCAAACCGG AAGATTTAAC CGACAGCGAG
CGCCAGGAAA TTACCGCTGC GCTGTGGAAA GAAATGCGCG AGATTTATTA CGGGCGCAAT
ATGCCAGCTG TTTAA
 
Protein sequence
MKKLKLHGFN NLTKSLSFCI YDICYAKTAE ERDGYIAYID ELYNANRLTE ILSETCSIIG 
ANILNIARQD YEPQGASVTI LVSEEPVDPK LIDKTEHPGP LPETVVAHLD KSHICVHTYP
ESHPEGGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTIDYRVRGF TRDINGMKHF
IDHEINSIQN FMSDDMKALY DMVDVNVYQE NIFHTKMLLK EFDLKHYMFH TKPEDLTDSE
RQEITAALWK EMREIYYGRN MPAV