Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0064 |
Symbol | setA |
ID | 6270233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 68685 |
End bp | 69767 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641724323 |
Product | sugar efflux transporter A |
Protein accession | YP_001878882 |
Protein GI | 187732583 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTGGA TAATGACGAT GGCTCGCCGT ATGAACGGTG TTTACGCGGC ATTTATGCTG GTCGCTTTTA TGATGGGGGT GGCCGGGGCG CTACAGGCTC CTACATTGAG CTTATTTCTG AGTCGTGAGG TTGGCGCGCA ACCTTTCTGG ATCGGACTCT TTTATACGGT GAATACTATT GCTGGGATCG GCGTAAGCCT CTGGTTGGCA AAACGTTCTG ACAGTCAGGG CGATCGGCGA AAACTGATTA TATTTTGCTG TTTGATGGCT ATCGGCAATG CGCCATTGTT TGCATTTAAT CGTCATTATC TGACGCTTAT CACCTGTGGT GTGCTTCTGG CATCTCTGGC CAATACGGCA ATGCCACAGT TATTTGCTCT GGCGCGGGAA TATGCGGATA ACTCGGCGCG AGAAGTGGTG ATGTTTTCGA TTGCCGCCGG GATATTCACA CTCAGTCTGG TATTGATTGC ATTTATGCTT CCGTCTGTGG CGCGGGTAGA ACTGCCGTCG GAAAATGCTT TATCAATGCA AGGTGGCTGG CAGGATAGTA ACGTACGGAT GTTATTTGTC GCCTCGACGT TAATGTGGAC CTGCAACACC ATGTACATTA TTGATATGCC GTTGTGGATC AGTAGCGAGT TAGGATTGCC AGACAAACTG GCGGGTTTCC TGATGGGGAC GGCAGCTGGA CTGGAAATAC CAGCAATGAT TCTGGCTGGC TACTATGTCA AACGTTATGG TAAGCGGCGA ATGATGGTCA TAGCAGTGGC GGCAGGAGTA CTGTTTTACA CCGGATTGAT TTTCTTTCAT AGCCGTATGG CGTTGATGAC GCTGCAACTT TTTAACGCTG TATTTATCGG CATTGTTGCG GGTATTGGGA TGCTATGGTT TCAGGATTTA ATGCCTGGAA GAGCGGGGGC AGCTACCACC TTATTTACTA ACAGTATTTC TACCGGGGTA ATTCTGGCTG GCGTTATTCA GGGAGCAATT GCACAAAGTT GGGGGCACTT TGCTGTCTAC TGGGTAATTG CGGTTATTTC TGTTGTCGCA TTATTTTTAA CCGCAAAGGT TAAAGACGTT TGA
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Protein sequence | MIWIMTMARR MNGVYAAFML VAFMMGVAGA LQAPTLSLFL SREVGAQPFW IGLFYTVNTI AGIGVSLWLA KRSDSQGDRR KLIIFCCLMA IGNAPLFAFN RHYLTLITCG VLLASLANTA MPQLFALARE YADNSAREVV MFSIAAGIFT LSLVLIAFML PSVARVELPS ENALSMQGGW QDSNVRMLFV ASTLMWTCNT MYIIDMPLWI SSELGLPDKL AGFLMGTAAG LEIPAMILAG YYVKRYGKRR MMVIAVAAGV LFYTGLIFFH SRMALMTLQL FNAVFIGIVA GIGMLWFQDL MPGRAGAATT LFTNSISTGV ILAGVIQGAI AQSWGHFAVY WVIAVISVVA LFLTAKVKDV
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