| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0052 |
|---|
| Symbol | polB |
|---|
| ID | 6271466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 54578 |
|---|
| End bp | 56929 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641724311 |
|---|
| Product | DNA polymerase II |
|---|
| Protein accession | YP_001878871 |
|---|
| Protein GI | 187730247 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAGG CAGGTTTTAT CTTAACCCGA CACTGGCGGG ACACCCCGCA AGGGACAGAA
GTCTCCTTCT GGCTGGCGAC GGACAACGGG CCGTTGCAGG TTACGCTTGC ACCGCAAGAG
TCCGTGGCGT TTATTCCCGC CGATCAGGTT CCCCGCGCTC AGCATATTTT GCAGGGTGAA
CAAGGCTTTC GCCTGACACC GCTGGCGTTA AAGGATTTTC ACCGCCAGCC GGTGTATGGC
CTTTACTGTC GCGCCCATCG CCAATTGATG AATTACGAAA AGCGCCTGCG TGAAGGTGGC
GTTACCGTCT ACGAGGCCGA TGTGCGCCCG CCAGAACGCT ATCTGATGGA GCGGTTTATC
ACCTCACCGG TGTGGGTCGA GGGTGATATG CACAATGGCA CTATCGTTAA TGCCCGTCTG
AAACCGCATC CCGACTATCG TCCGCCGCTC AAGTGGGTTT CTATAGATAT TGAAACCACC
CGCCACGGTG AGCTGTACTG CATCGGCCTG GAAGGCTGCG GGCAGCGCAT CGTTTATATG
CTGGGGCCGG AGAATGGCGA CGCCTCCTCG CTTGATTTCG AACTGGAATA CGTCGCCAGC
CGCCCGCAGT TGCTGGAAAA ACTCAACGCC TGGTTTGCCA ACTACGATCC TGATGTGATC
ATCGGTTGGA ACGTGGTGCA GTTCGATCTG CGAATGCTGC AAAAACATGC CGAGCGTTAC
CGTCTTCCGC TGCGTCTTGG GCGCGATAAT AGCGAGCTGG AGTGGCGCGA GCACGGCTTT
AAAAACGGCG TCTTTTTTGC CCAGGCTAAA GGTCGGCTAA TTATCGACGG TATCGAGGCG
CTGAAATCCG CGTTCTGGAA TTTCTCTTCA TTCTCGCTGG AAACTGTCGC TCAGGAGCTA
TTAGGCGAAG GAAAATCTAT CGATAACCCG TGGGATCGAA TGGACGAAAT TGACCGCCGT
TTCGCCGAAG ATAAACCTGC GCTGGCAACT TATAACCTGA AAGATTGCGA GCTGGTGACG
CAGATCTTCC ACAAAACTGA AATCATGCCA TTTTTACTCG AACGGGCAAC GGTGAACGGC
CTGCCGGTGG ACCGACACGG CGGTTCGGTG GCGGCATTTG GTCATCTCTA TTTTCCGCGA
ATGCATCGCG CTGGTTATGT CGCGCCTAAT CTCGGCGAAG TGCCGCCGCA CGCCAGCCCT
GGCGGCTACG TGATGGATTC ACGGCCAGGG CTTTATGATT CAGTGCTGGT GCTGGACTAT
AAAAGCCTGT ACCCGTCGAT CATCCGCACC TTTCTGATTG ATCCCGTCGG GCTGGTGGAA
GGCATGGCGC AGCCTGATCC AGAGCACAGT ACCGAAGGTT TTCTCGATGC CTGGTTCTCG
CGAGAAAAAC ATTGCCTGCC GGAGATTGTG ACTAACATCT GGCACGGGCG CGATGAAGCC
AAACGCCAGG GTAACAAACC GCTGTCGCAG GCGCTGAAAA TCATCATGAA TGCCTTTTAT
GGCGTGCTCG GCACCACCGC CTGCCGCTTC TTCGATCCGC GGCTGGCATC GTCGATCACC
ATGCGTGGTC ATCAGATCAT GCGGCAAACC AAAGCGTTGA TTGAAGCACA GGGCTACGAC
GTTATCTACG GCGATACCGA CTCAACGTTT GTCTGGCTGA AAGGCGCACA TTCGGAAGAA
GAAGCGGCGA AAATCGGTCG TGCACTGGTG CAGCACGTTA ACGCCTGGTG GGCGGAAACG
CTGCAAAAAC AACGGCTGAC CAGCGCATTA GAACTGGAGT ATGAAACCCA TTTCTGCCGT
TTTCTGATAC CAACCATTCG CGGAGCCGAT ACCGGCAGTA AAAAGCGCTA CGCCGGGCTG
ATTCAGGAGG GCGATAAACA GCGGATGGTG TTTAAAGGGC TGGAAACCGT GCGCACCGAC
TGGACGCCGC TGGCCCAGCA GTTTCAGCAG GAGCTATACC TGCGCATCTT CCGCAACGAG
CCATATCAGG AATATGTACG CGAAACCATC GACAAACTGA TGGCGGGTGA ACTGGATGCG
CGACTGGTTT ACCGTAAACG CCTTCGCCGT CCGCTGAGCG AGTATCAGCG TAATGTGCCG
CCTCATGTAC GCGCCGCTCG CCTTGCCGAT GAAGAAAACC AAAAGCGTGG TCGCCCCTTG
CAATATCAGA ATCGCGGCAC CATTAAGTAC GTATGGACCA CCAACGGCCC GGAGCCGCTG
GACTACCAAC GTTCACCACT GGATTACGAA CACTATCTGA CCCGCCAGCT ACAACCCGTG
GCGGAGGGAA TACTCCCTTT TATTGAGGAT AATTTTGCTA CACTTATGAC CGGGCAACTT
GGGCTATTTT GA
|
|---|
| Protein sequence | MAQAGFILTR HWRDTPQGTE VSFWLATDNG PLQVTLAPQE SVAFIPADQV PRAQHILQGE
QGFRLTPLAL KDFHRQPVYG LYCRAHRQLM NYEKRLREGG VTVYEADVRP PERYLMERFI
TSPVWVEGDM HNGTIVNARL KPHPDYRPPL KWVSIDIETT RHGELYCIGL EGCGQRIVYM
LGPENGDASS LDFELEYVAS RPQLLEKLNA WFANYDPDVI IGWNVVQFDL RMLQKHAERY
RLPLRLGRDN SELEWREHGF KNGVFFAQAK GRLIIDGIEA LKSAFWNFSS FSLETVAQEL
LGEGKSIDNP WDRMDEIDRR FAEDKPALAT YNLKDCELVT QIFHKTEIMP FLLERATVNG
LPVDRHGGSV AAFGHLYFPR MHRAGYVAPN LGEVPPHASP GGYVMDSRPG LYDSVLVLDY
KSLYPSIIRT FLIDPVGLVE GMAQPDPEHS TEGFLDAWFS REKHCLPEIV TNIWHGRDEA
KRQGNKPLSQ ALKIIMNAFY GVLGTTACRF FDPRLASSIT MRGHQIMRQT KALIEAQGYD
VIYGDTDSTF VWLKGAHSEE EAAKIGRALV QHVNAWWAET LQKQRLTSAL ELEYETHFCR
FLIPTIRGAD TGSKKRYAGL IQEGDKQRMV FKGLETVRTD WTPLAQQFQQ ELYLRIFRNE
PYQEYVRETI DKLMAGELDA RLVYRKRLRR PLSEYQRNVP PHVRAARLAD EENQKRGRPL
QYQNRGTIKY VWTTNGPEPL DYQRSPLDYE HYLTRQLQPV AEGILPFIED NFATLMTGQL
GLF
|
|---|
| |