Gene SbBS512_E0031 details

Gene Information

• Locus tag: SbBS512_E0031
• Symbol: lspA
• ID: 6270666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 28787
• End bp: 29281
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641724291
• Product: lipoprotein signal peptidase
• Protein accession: YP_001878851
• Protein GI: 187733568
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.112205
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAAT CGATCTGTTC AACAGGGCTA CGCTGGCTGT GGCTGGTGGT AGTCGTGCTG 
ATTATCGATC TGGGCAGCAA ATACCTGATC CTCCAGAACT TTGCTCTGGG GGATACGGTC 
CCGCTGTTCC CGTCGCTTAA TCTGCATTAT GCGCGTAACT ATGGCGCGGC GTTTAGTTTC 
CTTGCCGATA GCGGCGGCTG GCAGCGTTGG TTCTTTGCCG GTATTGCGAT TGGTATTAGC 
GTGATCCTGG CAGTGATGAT GTATCGCTCG AAGGCCACGC AGAAGCTAAA CAATATCGCT 
TACGCGCTGA TTATTGGCGG CGCGCTGGGC AACCTGTTCG ACCGCCTGTG GCACGGCTTC 
GTTGTCGATA TGATCGACTT CTACGTCGGC GACTGGCACT TCGCCACCTT CAACCTTGCC 
GATACTGCCA TCTGTGTCGG TGCGGCACTG ATTGTGCTGG AAGGTTTTTT GCCTTCTAGA 
GCGAAAAAAC AATAA 

 

Protein sequence

MSQSICSTGL RWLWLVVVVL IIDLGSKYLI LQNFALGDTV PLFPSLNLHY ARNYGAAFSF 
LADSGGWQRW FFAGIAIGIS VILAVMMYRS KATQKLNNIA YALIIGGALG NLFDRLWHGF 
VVDMIDFYVG DWHFATFNLA DTAICVGAAL IVLEGFLPSR AKKQ